[Hub]/) : Traits : Standing height :

chr6:44,079,216-46,043,561

Best TWAS P=1.59e-25 · Best GWAS P=1.65e-21 conditioned to 0.479

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Visceral Omentum SUPT3H 0.27 0.10 lasso 7 0.06 3.4e-04 7.3 -9.4 5.1e-21 0.63 0.92 0.06 FALSE
2 GTEx Artery Tibial SUPT3H 0.13 0.01 enet 21 0.02 1.9e-02 -7.9 -9.4 4.4e-21 0.55 0.25 0.63 FALSE
3 GTEx Cells EBV-transformed lymphocytes SUPT3H 0.20 0.08 lasso 6 0.10 3.0e-04 7.4 -7.2 5.0e-13 0.66 0.24 0.45 FALSE
4 GTEx Esophagus Gastroesophageal Junction SUPT3H 0.27 0.01 lasso 3 0.00 2.7e-01 -8.7 -8.2 2.4e-16 0.83 0.03 0.78 FALSE
5 GTEx Esophagus Mucosa SUPT3H 0.08 0.09 lasso 3 0.08 6.4e-06 7.3 -8.2 3.8e-16 0.55 0.76 0.14 FALSE
6 GTEx Esophagus Muscularis SUPT3H 0.10 0.03 enet 20 0.02 1.3e-02 -8.7 -8.6 8.7e-18 0.71 0.01 0.95 FALSE
7 GTEx Lung SUPT3H 0.10 0.06 enet 21 0.03 1.3e-03 7.0 -7.4 1.1e-13 0.49 0.68 0.21 FALSE
8 GTEx Nerve Tibial SUPT3H 0.17 0.12 lasso 5 0.10 2.2e-07 7.0 -7.0 2.5e-12 0.51 1.00 0.00 FALSE
9 GTEx Pancreas SUPT3H 0.11 0.07 lasso 2 0.05 3.6e-03 7.6 -7.6 2.3e-14 0.53 0.14 0.63 FALSE
10 GTEx Skin Sun Exposed Lower leg SUPT3H 0.07 0.03 lasso 5 0.04 4.2e-04 7.0 -7.2 6.6e-13 0.46 0.48 0.04 FALSE
11 GTEx Spleen SUPT3H 0.32 0.06 enet 12 0.11 9.5e-04 6.2 -7.1 1.6e-12 0.41 0.29 0.20 FALSE
12 GTEx Thyroid SUPT3H 0.29 0.07 lasso 8 0.07 7.3e-06 -8.5 -10.0 2.4e-23 0.52 0.88 0.06 TRUE
13 METSIM Adipose SUPT3H 0.11 0.04 bslmm 657 0.06 2.7e-09 7.4 -7.2 6.5e-13 0.59 0.92 0.08 FALSE
14 The Cancer Genome Atlas Breast Invasive Carcinoma SUPT3H 0.02 0.01 blup 191 0.01 3.0e-03 7.3 -6.7 1.5e-11 0.41 0.84 0.02 FALSE
15 The Cancer Genome Atlas Colon Adenocarcinoma SUPT3H 0.08 0.01 blup 191 0.05 1.0e-03 7.8 -10.4 1.6e-25 0.85 0.02 0.94 TRUE
16 The Cancer Genome Atlas Lung Adenocarcinoma SUPT3H 0.03 0.03 lasso 2 0.02 8.9e-04 8.0 -7.4 1.4e-13 0.48 0.31 0.05 FALSE
17 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma SUPT3H 0.12 0.08 blup 191 0.09 2.8e-04 8.0 -8.3 6.9e-17 0.62 0.49 0.29 FALSE
18 The Cancer Genome Atlas Thyroid Carcinoma SUPT3H 0.06 0.04 lasso 4 0.05 2.1e-05 7.4 -9.6 1.1e-21 0.65 0.56 0.26 FALSE