TWAS
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Usage
Models
Genes
Traits
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Traits
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Standing height
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chr12:95,624,576-96,193,034
Best TWAS P=4.16e-08 · Best GWAS P=5.09e-06 conditioned to 0.00895
95.6M
95.7M
95.8M
95.9M
96M
96.1M
96.2M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
USP44
0.11
0.03
blup
66
0.03
0.0167
-2.0
5.5
4.2e-08
-0.39
0
0.05
TRUE
1
The Cancer Genome Atlas
Liver Hepatocellular Carcinoma
METAP2
0.11
0.07
lasso
3
0.05
0.0021
4.5
-5.2
2.5e-07
0.39
0
0.21
FALSE