Best TWAS P=6.38e-13 · Best GWAS P=1.13e-31 conditioned to 2.42e-20
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | GPC5 | 0.28 | 0.18 | bslmm | 1091 | 0.27 | 6.6e-33 | 8.5 | 7.2 | 6.4e-13 | 0.62 | 1.00 | 0.00 | TRUE |
| 2 | ROSMAP | Brain Pre-frontal Cortex | GPC5 | 0.26 | 0.08 | enet | 65 | 0.12 | 1.4e-14 | 8.5 | 6.0 | 1.5e-09 | 0.54 | 0.85 | 0.15 | FALSE |