Best TWAS P=1.83e-08 · Best GWAS P=1.37e-08 conditioned to 0.138
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue (Male) | RAD51C | 0.18 | 0.09 | lasso | 9 | 0.05 | 0.0229 | 4.1 | 5.3 | 1.1e-07 | 0.89 | 0.03 | 0.77 | FALSE |
2 | The Cancer Genome Atlas | Soft Tissue Sarcoma | MTMR4 | 0.07 | 0.00 | blup | 40 | 0.03 | 0.0066 | 5.7 | -5.6 | 1.8e-08 | -0.89 | 0.00 | 0.78 | TRUE |