Best TWAS P=1.6e-20 · Best GWAS P=1.71e-95 conditioned to 4.74e-71
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Brain Hippocampus | BMP2 | 0.39 | 0.00 | enet | 27 | 0.04 | 0.036 | -18 | 9.3 | 1.6e-20 | 0.28 | 0.11 | 0.06 | TRUE |
2 | GTEx | Ovary | BMP2 | 0.49 | -0.01 | enet | 45 | 0.05 | 0.024 | 8 | -6.3 | 3.4e-10 | -0.30 | 0.05 | 0.14 | TRUE |