Best TWAS P=1.22e-07 · Best GWAS P=2e-09 conditioned to 3.11e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PKP4 | 0.06 | 0 | blup | 160 | 0.02 | 0.0035 | -5.6 | 5.3 | 1.2e-07 | -0.29 | 0.03 | 0.11 | TRUE |