Best TWAS P=3.25e-09 · Best GWAS P=1.2e-08 conditioned to 0.311
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | IRAK1BP1 | 0.12 | 0.10 | lasso | 4 | 0.15 | 2.7e-12 | -5.5 | -5.1 | 2.7e-07 | 0.89 | 0.04 | 0.96 | FALSE |
2 | GTEx | Adipose Visceral Omentum | IRAK1BP1 | 0.17 | 0.16 | enet | 20 | 0.19 | 2.5e-10 | -5.6 | -5.2 | 1.8e-07 | 0.95 | 0.03 | 0.97 | FALSE |
3 | GTEx | Adrenal Gland | IRAK1BP1 | 0.33 | 0.40 | enet | 31 | 0.40 | 1.5e-15 | -5.6 | -5.5 | 4.9e-08 | 0.95 | 0.03 | 0.97 | FALSE |
4 | GTEx | Artery Aorta | IRAK1BP1 | 0.17 | 0.15 | lasso | 1 | 0.11 | 1.6e-06 | -5.6 | -5.6 | 2.4e-08 | 0.98 | 0.03 | 0.97 | FALSE |
5 | GTEx | Artery Tibial | IRAK1BP1 | 0.11 | 0.15 | lasso | 4 | 0.16 | 1.4e-12 | -5.6 | -5.4 | 7.1e-08 | 0.96 | 0.03 | 0.97 | FALSE |
6 | GTEx | Brain Cerebellar Hemisphere | IRAK1BP1 | 0.21 | 0.13 | enet | 26 | 0.12 | 4.4e-04 | 3.9 | -5.4 | 6.1e-08 | 0.84 | 0.04 | 0.94 | FALSE |
7 | GTEx | Brain Nucleus accumbens basal ganglia | IRAK1BP1 | 0.11 | 0.08 | lasso | 10 | 0.07 | 6.0e-03 | -5.5 | 5.7 | 1.4e-08 | -0.96 | 0.04 | 0.86 | FALSE |
8 | GTEx | Colon Sigmoid | IRAK1BP1 | 0.19 | 0.20 | lasso | 2 | 0.17 | 1.0e-06 | -5.6 | -5.6 | 2.4e-08 | 0.98 | 0.03 | 0.96 | FALSE |
9 | GTEx | Esophagus Muscularis | IRAK1BP1 | 0.17 | 0.22 | lasso | 4 | 0.22 | 1.6e-13 | -5.6 | -5.5 | 4.0e-08 | 0.96 | 0.03 | 0.97 | FALSE |
10 | GTEx | Esophagus Muscularis | PHIP | 0.08 | 0.04 | enet | 15 | 0.02 | 3.6e-02 | -5.7 | -5.9 | 3.3e-09 | 0.88 | 0.03 | 0.93 | TRUE |
11 | GTEx | Heart Atrial Appendage | IRAK1BP1 | 0.15 | 0.14 | lasso | 2 | 0.12 | 4.6e-06 | -5.5 | -5.2 | 1.7e-07 | 0.97 | 0.03 | 0.96 | FALSE |
12 | GTEx | Heart Left Ventricle | IRAK1BP1 | 0.17 | 0.20 | lasso | 5 | 0.20 | 8.7e-11 | -5.5 | -5.5 | 3.4e-08 | 0.98 | 0.03 | 0.97 | FALSE |
13 | GTEx | Lung | IRAK1BP1 | 0.14 | 0.18 | lasso | 5 | 0.17 | 3.9e-13 | -5.5 | -5.4 | 7.7e-08 | 0.97 | 0.04 | 0.96 | FALSE |
14 | GTEx | Muscle Skeletal | IRAK1BP1 | 0.10 | 0.11 | lasso | 2 | 0.10 | 1.3e-09 | -5.6 | -5.6 | 1.8e-08 | 0.98 | 0.03 | 0.97 | FALSE |
15 | GTEx | Ovary | IRAK1BP1 | 0.13 | 0.15 | lasso | 2 | 0.06 | 1.2e-02 | -5.5 | -5.5 | 3.3e-08 | 0.98 | 0.04 | 0.90 | FALSE |
16 | GTEx | Prostate | IRAK1BP1 | 0.15 | 0.08 | enet | 7 | 0.09 | 2.4e-03 | -5.5 | -5.2 | 2.4e-07 | 0.91 | 0.05 | 0.86 | FALSE |
17 | GTEx | Testis | IRAK1BP1 | 0.39 | 0.56 | lasso | 11 | 0.58 | 7.7e-31 | -5.6 | -5.5 | 3.1e-08 | 0.98 | 0.03 | 0.97 | FALSE |
18 | GTEx | Thyroid | IRAK1BP1 | 0.09 | 0.12 | lasso | 9 | 0.11 | 5.2e-09 | -5.5 | -5.5 | 3.1e-08 | 0.97 | 0.03 | 0.97 | FALSE |