Best TWAS P=3.26e-09 · Best GWAS P=9.48e-10 conditioned to 0.000537
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | NCALD | 0.24 | 0.20 | lasso | 5 | 0.19 | 9.2e-09 | -5.3 | 5.3 | 8.8e-08 | -0.72 | 0.16 | 0.83 | FALSE |
| 2 | GTEx | Testis | KB-1107E3.1 | 0.26 | 0.08 | enet | 31 | 0.10 | 2.8e-05 | -5.3 | 5.9 | 3.3e-09 | -0.54 | 0.10 | 0.83 | TRUE |