Best TWAS P=1.66e-08 · Best GWAS P=5.22e-09 conditioned to 0.0585
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Thyroid Carcinoma | PTP4A1 | 0.05 | 0 | blup | 34 | 0.03 | 0.001 | -3.7 | -5.6 | 1.7e-08 | 0.87 | 0.02 | 0.71 | TRUE |