Best TWAS P=1.47e-14 · Best GWAS P=9.51e-16 conditioned to 0.00598
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | METSIM | Adipose | ZNF652 | 0.05 | 0.03 | lasso | 8 | 0.05 | 6.2e-08 | -3.6 | -5.1 | 2.9e-07 | -0.69 | 0.67 | 0.33 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | ZNF652 | 0.09 | 0.01 | enet | 12 | 0.05 | 5.5e-04 | 6.9 | -5.9 | 3.4e-09 | -0.55 | 0.02 | 0.43 | FALSE |
| 3 | The Cancer Genome Atlas | Glioblastoma Multiforme | GNGT2 | 0.22 | 0.00 | blup | 47 | 0.00 | 3.1e-01 | 4.7 | 5.2 | 2.2e-07 | 0.76 | 0.01 | 0.12 | FALSE |
| 4 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ZNF652 | 0.03 | 0.03 | enet | 5 | 0.03 | 2.6e-04 | 6.7 | -7.2 | 7.8e-13 | -0.90 | 0.02 | 0.96 | FALSE |
| 5 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ZNF652 | 0.06 | 0.03 | lasso | 4 | 0.02 | 1.6e-03 | 6.8 | -6.3 | 3.1e-10 | -0.76 | 0.19 | 0.60 | FALSE |
| 6 | The Cancer Genome Atlas | Lung Adenocarcinoma | ZNF652 | 0.05 | 0.02 | blup | 55 | 0.02 | 2.5e-03 | 8.0 | -7.7 | 1.5e-14 | -0.87 | 0.01 | 0.98 | TRUE |