TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hayfever, allergic rhinitis or eczema
:
→
chr1:2,235,672-2,742,491
Best TWAS P=2.04e-09 · Best GWAS P=4.11e-13 conditioned to 5.96e-06
2.3M
2.4M
2.5M
2.6M
2.7M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
TNFRSF14
0.18
0.02
blup
52
0.10
0.00024
-1.2
-6.0
2.0e-09
0.61
0.01
0.56
TRUE
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
LOC115110
0.01
0.01
enet
14
0.01
0.00052
-4.3
5.2
2.3e-07
-0.53
0.12
0.29
FALSE