Best TWAS P=4.1e-09 · Best GWAS P=4.03e-11 conditioned to 2.31e-05
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Brain Cortex | PIBF1 | 0.25 | 0.23 | lasso | 3 | 0.21 | 2.1e-06 | -5.5 | 5.9 | 4.1e-09 | -0.50 | 0.24 | 0.63 | TRUE |
2 | GTEx | Skin Not Sun Exposed Suprapubic | PIBF1 | 0.19 | 0.05 | lasso | 5 | 0.04 | 3.1e-03 | -5.5 | 5.4 | 5.6e-08 | -0.45 | 0.23 | 0.36 | FALSE |