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chr1:172,311,679-173,713,130
Best TWAS P=2.54e-13 · Best GWAS P=3.7e-13 conditioned to 1
172.4M
172.6M
172.8M
173M
173.2M
173.4M
173.6M
0
2
4
6
8
10
12
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
TNFSF4
0.08
0.07
lasso
3
0.06
5.2e-07
7.3
7.3
2.5e-13
1.0
0.00
1.00
TRUE
1
CommonMind
Brain Pre-frontal Cortex
TNFSF18
0.24
0.22
bslmm
355
0.22
1.5e-26
6.8
6.8
1.0e-11
0.9
0.05
0.95
FALSE