Best TWAS P=2.54e-13 · Best GWAS P=3.7e-13 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | TNFSF18 | 0.24 | 0.22 | bslmm | 355 | 0.22 | 1.5e-26 | 6.8 | 6.8 | 1.0e-11 | 0.9 | 0.05 | 0.95 | FALSE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TNFSF4 | 0.08 | 0.07 | lasso | 3 | 0.06 | 5.2e-07 | 7.3 | 7.3 | 2.5e-13 | 1.0 | 0.00 | 1.00 | TRUE |