TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
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Medication for cholesterol
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chr19:48,918,157-49,452,462
Best TWAS P=1.47e-09 · Best GWAS P=4.33e-07 conditioned to 0.486
48.9M
49M
49.1M
49.2M
49.3M
49.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Thyroid Carcinoma
NTN5
0.11
0.07
blup
43
0.09
2.6e-09
-5.1
-6.0
1.5e-09
0.89
0.01
0.99
TRUE
1
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
FUT2
0.10
0.01
blup
51
0.05
9.8e-04
-4.8
5.1
2.8e-07
-0.88
0.01
0.90
FALSE