Best TWAS P=2.98e-13 · Best GWAS P=6.73e-14 conditioned to 0.0438
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PKHD1 | 0.15 | 0.00 | enet | 8 | 0.03 | 1.1e-02 | -4.6 | 5.3 | 1e-07 | 0.40 | 0.44 | 0.04 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PKHD1 | 0.04 | 0.05 | lasso | 3 | 0.05 | 1.7e-06 | 7.0 | -7.3 | 3e-13 | -0.92 | 0.06 | 0.94 | TRUE |