Best TWAS P=8.79e-08 · Best GWAS P=1.86e-07 conditioned to 0.248
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | FNTA | 0.07 | 0.05 | enet | 14 | 0.06 | 1.5e-05 | -5.0 | 5.3 | 1.5e-07 | -0.83 | 0.03 | 0.97 | FALSE |
2 | GTEx | Breast Mammary Tissue (Male) | HGSNAT | 0.16 | 0.10 | enet | 23 | 0.08 | 7.6e-03 | -4.8 | -5.4 | 8.8e-08 | 0.87 | 0.04 | 0.66 | TRUE |
3 | GTEx | Lung | FNTA | 0.06 | 0.05 | enet | 11 | 0.04 | 2.2e-04 | -5.1 | 5.2 | 2.1e-07 | -0.88 | 0.03 | 0.94 | FALSE |