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chr12:89,116,708-90,799,212
Best TWAS P=6.21e-23 · Best GWAS P=3.91e-28 conditioned to 1.09e-06
89.2M
89.4M
89.6M
89.8M
90M
90.2M
90.4M
90.6M
90.8M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Artery Tibial
ATP2B1
0.08
0.01
enet
10
0.03
3.5e-03
-11.0
-9.9
6.2e-23
0.87
0.01
0.96
TRUE
5
The Cancer Genome Atlas
Cervical Squamous Cell Carcinoma
LOC338758
0.14
0.00
enet
6
0.01
6.2e-02
1.8
-7.4
1.5e-13
0.31
0.01
0.07
TRUE
2
GTEx
Lung
RP11-981P6.1
0.08
0.01
lasso
3
0.01
3.9e-02
-4.7
-6.8
7.9e-12
0.60
0.25
0.28
FALSE
3
GTEx
Prostate
POC1B
0.25
0.00
enet
37
0.01
1.6e-01
-10.1
6.7
1.7e-11
-0.50
0.02
0.63
FALSE
4
METSIM
Adipose
POC1B
0.07
0.03
bslmm
381
0.03
5.2e-05
-4.6
5.4
7.2e-08
-0.55
0.90
0.02
FALSE