Best TWAS P=6.31e-08 · Best GWAS P=1.2e-06 conditioned to 0.191
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FAM8A1 | 0.07 | -0.01 | blup | 30 | 0.02 | 0.02440 | 4.1 | -5.2 | 1.6e-07 | -0.06 | 0.00 | 0.11 | FALSE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CAP2 | 0.04 | 0.00 | blup | 90 | 0.03 | 0.00053 | 4.6 | 5.4 | 6.3e-08 | 0.73 | 0.01 | 0.59 | TRUE |