Best TWAS P=9.56e-09 · Best GWAS P=1.04e-12 conditioned to 0.000225
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CAPZA2 | 0.04 | 0.00 | blup | 367 | 0.01 | 6.1e-02 | -2.8 | 5.5 | 3.9e-08 | -0.24 | 0.15 | 0.20 | TRUE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | TES | 0.06 | 0.03 | blup | 70 | 0.06 | 7.1e-07 | 4.4 | -5.7 | 9.6e-09 | 0.47 | 0.24 | 0.73 | TRUE |