[Hub]/) : Traits : Height : ← →

chr11:58,686,121-60,333,566

Best TWAS P=5.98e-13 · Best GWAS P=2.88e-12 conditioned to 0.46

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adipose Subcutaneous	STX3	0.13	0.06	lasso	2	0.06	1.2e-05	-5.8	6.0	2.4e-09	-0.79	0.21	0.76	FALSE
2	GTEx	Artery Tibial	STX3	0.06	0.09	lasso	2	0.08	1.3e-06	-5.8	5.8	7.8e-09	-0.77	0.77	0.22	FALSE
3	GTEx	Brain Hippocampus	AP000442.1	0.20	0.17	lasso	2	0.09	4.3e-03	-5.7	-5.9	4.4e-09	0.77	0.11	0.28	FALSE
4	GTEx	Brain Nucleus accumbens basal ganglia	AP000442.1	0.21	0.00	lasso	2	0.02	9.8e-02	-5.8	-5.8	8.6e-09	0.77	0.08	0.75	FALSE
5	GTEx	Muscle Skeletal	AP000442.1	0.07	0.05	enet	9	0.05	4.9e-06	-6.9	-6.2	4.3e-10	0.84	0.01	0.98	FALSE
6	GTEx	Nerve Tibial	STX3	0.16	0.15	enet	12	0.15	4.6e-11	-5.8	6.3	3.7e-10	-0.84	0.45	0.55	FALSE
7	GTEx	Pituitary	AP000442.1	0.24	0.28	enet	15	0.24	1.3e-06	-6.8	-6.5	1.0e-10	0.88	0.02	0.98	FALSE
8	GTEx	Testis	STX3	0.14	0.03	lasso	6	0.06	9.7e-04	-6.2	5.3	1.4e-07	-0.66	0.46	0.30	FALSE
9	NTR	Blood	TCN1	0.03	0.02	blup	373	0.02	6.2e-06	-4.7	-7.2	6.0e-13	0.42	0.96	0.01	TRUE
10	ROSMAP	Brain Pre-frontal Cortex	STX3	0.07	0.08	lasso	9	0.08	1.6e-10	-7.0	6.9	4.3e-12	-0.92	0.02	0.98	FALSE
11	YFS	Blood	STX3	0.08	0.10	lasso	6	0.09	3.4e-29	-6.9	6.9	4.2e-12	-0.92	0.01	0.99	FALSE
12	The Cancer Genome Atlas	Colon Adenocarcinoma	MS4A4A	0.06	0.04	blup	79	0.05	1.1e-03	-5.2	-5.5	3.9e-08	0.19	0.05	0.90	FALSE
13	The Cancer Genome Atlas	Esophageal Carcinoma	PATL1	0.14	0.04	blup	32	0.06	4.3e-03	-6.9	6.6	3.5e-11	-0.90	0.00	0.87	TRUE
14	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	MS4A4A	0.05	0.07	lasso	2	0.06	4.6e-07	-5.1	-5.1	3.0e-07	0.19	0.02	0.98	FALSE
15	The Cancer Genome Atlas	Brain Lower Grade Glioma	MS4A4A	0.05	0.05	blup	79	0.05	1.3e-06	-4.8	-5.2	2.2e-07	0.20	0.03	0.96	FALSE
16	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	MS4A4A	0.03	0.02	blup	79	0.02	4.2e-03	-4.8	-5.5	3.1e-08	0.19	0.05	0.85	FALSE
17	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	MS4A4A	0.06	0.08	lasso	5	0.06	8.2e-05	-5.1	-5.2	2.6e-07	0.18	0.02	0.97	FALSE
18	The Cancer Genome Atlas	Prostate Adenocarcinoma	MS4A4A	0.07	0.03	blup	79	0.04	2.8e-05	-5.6	-5.2	2.4e-07	0.17	0.00	0.99	FALSE