Best TWAS P=8.27e-27 · Best GWAS P=5.07e-67 conditioned to 4.65e-42
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | GPC5 | 0.28 | 0.18 | bslmm | 1091 | 0.27 | 6.6e-33 | 12 | 10.7 | 8.3e-27 | 0.62 | 1.00 | 0.00 | TRUE |
| 2 | ROSMAP | Brain Pre-frontal Cortex | GPC5 | 0.26 | 0.08 | enet | 65 | 0.12 | 1.4e-14 | 12 | 8.8 | 8.7e-19 | 0.54 | 0.87 | 0.13 | FALSE |