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chr14:30,334,967-31,895,974

Best TWAS P=1.87e-13 · Best GWAS P=3.42e-13 conditioned to 0.296

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	G2E3	0.06	0.04	blup	397	0.04	4.4e-06	5.9	-5.2	1.9e-07	-0.77	0.03	0.97	FALSE
2	CommonMind	Brain Pre-frontal Cortex	SCFD1	0.16	0.18	lasso	3	0.18	2.6e-21	7.1	7.1	1.4e-12	0.91	0.02	0.98	FALSE
3	GTEx	Adipose Subcutaneous	SCFD1	0.12	0.11	lasso	2	0.10	8.5e-09	7.3	-7.3	3.3e-13	-0.96	0.01	0.99	FALSE
4	GTEx	Adipose Visceral Omentum	G2E3	0.17	0.08	lasso	4	0.08	6.2e-05	7.2	-7.0	3.5e-12	-0.89	0.02	0.97	FALSE
5	GTEx	Artery Tibial	G2E3	0.09	0.00	enet	2	0.00	2.1e-01	5.9	-6.4	1.6e-10	-0.77	0.03	0.76	FALSE
6	GTEx	Colon Transverse	SCFD1	0.14	0.13	lasso	3	0.13	8.1e-07	7.3	-7.1	1.2e-12	-0.95	0.02	0.98	FALSE
7	GTEx	Esophagus Mucosa	SCFD1	0.09	0.12	enet	11	0.11	1.0e-07	7.3	-7.4	1.9e-13	-0.94	0.02	0.98	TRUE
8	GTEx	Muscle Skeletal	SCFD1	0.06	0.04	lasso	3	0.02	2.1e-03	7.3	-7.0	2.7e-12	-0.94	0.02	0.92	FALSE
9	GTEx	Nerve Tibial	G2E3	0.06	0.04	lasso	4	0.01	1.2e-01	7.3	-7.2	4.8e-13	-1.00	0.02	0.97	FALSE
10	GTEx	Skin Not Sun Exposed Suprapubic	SCFD1	0.14	0.05	enet	26	0.08	2.3e-05	7.3	-6.1	1.1e-09	-0.74	0.03	0.96	FALSE
11	GTEx	Thyroid	SCFD1	0.10	0.08	enet	11	0.07	2.7e-06	7.1	-7.4	1.9e-13	-0.91	0.01	0.99	FALSE
12	GTEx	Whole Blood	SCFD1	0.09	0.07	lasso	6	0.07	2.1e-07	7.1	-7.2	7.8e-13	-0.91	0.02	0.98	FALSE
13	METSIM	Adipose	SCFD1	0.06	0.05	enet	8	0.05	2.0e-08	6.7	-7.0	2.0e-12	-0.90	0.06	0.94	FALSE
14	NTR	Blood	SCFD1	0.02	0.02	lasso	6	0.01	5.4e-05	7.1	-7.0	2.1e-12	-0.89	0.02	0.98	FALSE
15	YFS	Blood	SCFD1	0.05	0.04	enet	27	0.05	3.4e-17	6.5	-6.5	8.5e-11	-0.88	0.06	0.94	FALSE
16	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	SCFD1	0.09	0.04	blup	83	0.07	2.3e-04	6.5	-6.1	1.1e-09	-0.81	0.02	0.76	FALSE
17	The Cancer Genome Atlas	Colon Adenocarcinoma	SCFD1	0.04	0.02	blup	80	0.02	2.4e-02	6.1	-6.4	1.4e-10	-0.83	0.06	0.57	FALSE
18	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	SCFD1	0.03	0.01	blup	83	0.00	9.0e-02	6.7	-6.6	3.3e-11	-0.83	0.02	0.87	FALSE
19	The Cancer Genome Atlas	Brain Lower Grade Glioma	G2E3	0.03	0.00	enet	6	0.02	6.7e-04	7.1	-6.2	5.2e-10	-0.73	0.02	0.87	FALSE
20	The Cancer Genome Atlas	Thyroid Carcinoma	SCFD1	0.05	0.06	enet	14	0.07	2.9e-07	7.1	-7.1	9.6e-13	-0.93	0.01	0.99	FALSE