Best TWAS P=6.03e-08 · Best GWAS P=1.01e-09 conditioned to 5.79e-09
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | PSMB7 | 0.08 | 0.04 | lasso | 6 | 0.04 | 0.00034 | -4.5 | 5.2 | 1.8e-07 | -0.06 | 0.03 | 0.95 | FALSE |
2 | GTEx | Colon Transverse | PSMB7 | 0.13 | 0.02 | lasso | 3 | 0.03 | 0.01790 | -5.0 | 5.4 | 6.0e-08 | -0.05 | 0.03 | 0.73 | TRUE |