Best TWAS P=1.19e-07 · Best GWAS P=2.82e-07 conditioned to 0.353
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | RERE | 0.20 | 0.23 | lasso | 2 | 0.24 | 1.7e-19 | -4.9 | -5.3 | 1.4e-07 | 0.98 | 0.01 | 0.98 | FALSE |
2 | METSIM | Adipose | RERE | 0.08 | 0.12 | lasso | 17 | 0.13 | 1.8e-19 | -4.9 | -5.3 | 1.2e-07 | 0.89 | 0.02 | 0.98 | TRUE |