Best TWAS P=4.25e-12 · Best GWAS P=3.78e-22 conditioned to 1.52e-12
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | SPSB1 | 0.02 | 0.00 | enet | 12 | 0.01 | 3.5e-03 | -0.79 | -5.9 | 3.8e-09 | -0.48 | 0.08 | 0.3 | TRUE |
2 | YFS | Blood | SPSB1 | 0.03 | 0.03 | bslmm | 425 | 0.03 | 1.5e-09 | -6.73 | -6.9 | 4.2e-12 | -0.26 | 1.00 | 0.0 | TRUE |