4552 significantly associated models · 941 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 8655495 | 10125765 | 1 | 2 | 4.2e-12 | 3.8e-22 | 1.5e-12 | 47 | SPSB1 |
2 | 1 | 10920676 | 11564507 | 1 | 1 | 9.4e-08 | 2.6e-07 | 6.0e-01 | 99 | MTOR |
3 | 1 | 16142960 | 18027554 | 8 | 1 | 2.9e-11 | 2.2e-10 | 2.7e-01 | 97 | RP11-108M9.5 |
4 | 1 | 22197336 | 24446128 | 7 | 3 | 2.9e-15 | 6.8e-16 | 2.1e-01 | 98 | LUZP1 TCEA3 WNT4 |
5 | 1 | 25475418 | 27210721 | 7 | 1 | 1.2e-11 | 2.1e-08 | 2.0e-02 | 83 | RP1-125I3.2 |
6 | 1 | 35489692 | 36134052 | 1 | 1 | 4.0e-08 | 2.1e-08 | 1.0e+00 | 100 | ZMYM4 |
7 | 1 | 51063131 | 52677789 | 2 | 1 | 3.3e-08 | 5.9e-08 | 7.8e-03 | 76 | TTC39A |
8 | 1 | 85416796 | 86865383 | 1 | 1 | 9.0e-16 | 3.0e-14 | 4.7e-01 | 99 | ZNHIT6 |
9 | 1 | 93783795 | 94560938 | 1 | 1 | 1.8e-07 | 1.7e-07 | 1.0e+00 | 100 | BCAR3 |
10 | 2 | 8917977 | 10394558 | 3 | 1 | 2.1e-10 | 1.1e-09 | 1.0e+00 | 100 | ADAM17 |
11 | 2 | 10599493 | 12008798 | 1 | 1 | 4.6e-09 | 7.0e-09 | 1.0e+00 | 100 | PQLC3 |
12 | 2 | 23723720 | 26262948 | 9 | 4 | 1.8e-18 | 1.8e-15 | 2.1e-01 | 98 | ADCY3 ATAD2B DNMT3A POMC |
13 | 2 | 27074959 | 27600239 | 2 | 1 | 1.9e-10 | 5.0e-07 | 8.9e-03 | 73 | ABHD1 |
14 | 2 | 31394676 | 32958187 | 1 | 1 | 1.3e-07 | 2.8e-08 | 1.2e-03 | 66 | DPY30 |
15 | 2 | 37177258 | 38663242 | 1 | 1 | 5.6e-08 | 1.3e-08 | 1.0e+00 | 100 | CDC42EP3 |
16 | 2 | 42753863 | 44149442 | 1 | 1 | 1.0e-07 | 1.9e-11 | 3.1e-05 | 62 | ZFP36L2 |
17 | 2 | 57689942 | 59167557 | 1 | 1 | 1.5e-08 | 4.8e-10 | 9.3e-05 | 61 | FANCL |
18 | 2 | 65961112 | 69314667 | 7 | 9 | 4.6e-13 | 1.4e-22 | 5.0e-20 | 12 | ETAA1 MEIS1 WDR92 |
19 | 2 | 99204428 | 101456989 | 2 | 2 | 7.5e-13 | 1.3e-13 | 1.7e-01 | 97 | AFF3 LYG1 |
20 | 2 | 110852875 | 112621199 | 2 | 2 | 5.2e-11 | 4.8e-25 | 2.8e-25 | -1 | AC112229.7 BCL2L11 |
21 | 2 | 113495785 | 115418679 | 6 | 1 | 1.3e-15 | 3.7e-15 | 1.0e+00 | 100 | ACTR3 |
22 | 2 | 164657815 | 166503040 | 3 | 6 | 6.7e-40 | 1.6e-55 | 1.9e-02 | 98 | COBLL1 GRB14 SLC38A11 |
23 | 2 | 171683107 | 173114238 | 1 | 1 | 4.2e-14 | 1.1e-11 | 5.3e-01 | 99 | CYBRD1 |
24 | 2 | 187360440 | 189122229 | 3 | 1 | 1.7e-24 | 2.9e-28 | 1.4e-05 | 84 | CALCRL |
25 | 2 | 191048278 | 192497710 | 1 | 1 | 3.3e-08 | 8.0e-09 | 4.1e-03 | 75 | GLS |
26 | 2 | 206159496 | 207874372 | 4 | 1 | 8.9e-13 | 7.1e-13 | 1.2e-02 | 88 | NDUFS1 |
27 | 2 | 218382236 | 220733584 | 6 | 1 | 3.5e-10 | 4.5e-11 | 2.8e-11 | -2 | RP11-548H3.1 |
28 | 3 | 10617048 | 13608348 | 9 | 10 | 4.1e-29 | 3.0e-36 | NaN | NaN | ATG7 CAND2 MKRN2 TIMP4 VGLL4 |
29 | 3 | 33138549 | 34531898 | 2 | 1 | 1.7e-08 | 9.2e-06 | 4.3e-01 | 97 | RP11-10C24.2 |
30 | 3 | 36794597 | 38562579 | 1 | 2 | 3.3e-09 | 1.6e-11 | 4.4e-08 | 34 | ITGA9 |
31 | 3 | 43167735 | 44009459 | 2 | 2 | 7.1e-11 | 8.4e-09 | 6.3e-01 | 99 | ABHD5 ANO10 |
32 | 3 | 46016464 | 53985919 | 86 | 14 | 1.0e-35 | 5.1e-28 | NaN | NaN | AMT LOC440957 NBEAL2 NICN1 NICN1-AS1 P4HTM PRKAR2A RFT1 RHOA SEMA3B-AS1 TKT TMEM110 |
33 | 3 | 57749561 | 58447299 | 2 | 1 | 3.8e-09 | 2.8e-10 | 1.0e-02 | 83 | DNASE1L3 |
34 | 3 | 63804761 | 65692374 | 2 | 1 | 8.6e-26 | 7.1e-70 | 3.2e-46 | 35 | ADAMTS9-AS2 |
35 | 3 | 98838914 | 101160339 | 4 | 2 | 7.8e-12 | 2.2e-11 | 6.0e-06 | 54 | CMSS1 TFG |
36 | 3 | 128276332 | 130330135 | 12 | 7 | 2.3e-36 | 7.2e-48 | NaN | NaN | H1FX IFT122 MBD4 PLXND1 RPL32P3 TRH |
37 | 4 | 69713 | 2058475 | 14 | 7 | 9.8e-23 | 3.5e-19 | NaN | NaN | CTBP1 DGKQ IDUA MAEA SLC26A1 |
38 | 4 | 3006043 | 3514695 | 1 | 1 | 1.9e-07 | 2.5e-07 | 4.1e-01 | 97 | C4orf44 |
39 | 4 | 4774402 | 5270485 | 1 | 1 | 2.4e-13 | 5.8e-17 | 7.9e-15 | 14 | CYTL1 |
40 | 4 | 14310407 | 16291144 | 3 | 1 | 2.3e-10 | 7.6e-11 | 1.0e+00 | 100 | C1QTNF7 |
41 | 4 | 25052785 | 27725689 | 6 | 4 | 9.0e-14 | 1.3e-21 | 6.3e-02 | 96 | RBPJ SEL1L3 STIM2 |
42 | 4 | 55517005 | 57110821 | 5 | 8 | 4.1e-22 | 1.2e-21 | NaN | NaN | CLOCK PDCL2 SRD5A3 SRD5A3-AS1 TMEM165 |
43 | 4 | 88924176 | 90722145 | 2 | 3 | 4.8e-14 | 1.5e-39 | 4.6e-16 | 62 | FAM13A NAP1L5 |
44 | 4 | 105373669 | 106897596 | 1 | 1 | 2.3e-08 | 1.6e-15 | 1.1e-08 | 48 | TET2 |
45 | 4 | 119437972 | 121242474 | 2 | 1 | 9.7e-11 | 6.7e-09 | 6.5e-01 | 99 | USP53 |
46 | 4 | 121892436 | 124538705 | 5 | 2 | 4.9e-15 | 3.3e-13 | 7.6e-04 | 79 | ANXA5 NUDT6 |
47 | 4 | 145203531 | 146788825 | 2 | 2 | 2.6e-17 | 8.8e-24 | 8.0e-03 | 93 | ANAPC10 OTUD4 |
48 | 5 | 33296332 | 34739830 | 2 | 1 | 6.2e-11 | 4.7e-10 | 2.8e-01 | 97 | AMACR |
49 | 5 | 53761426 | 56923759 | 5 | 2 | 6.9e-13 | 6.2e-45 | 2.9e-35 | 22 | CTD-2310F14.1 GPX8 |
50 | 5 | 59490965 | 60885180 | 1 | 1 | 1.2e-07 | 1.5e-07 | 2.1e-02 | 81 | GNL3LP1 |
51 | 5 | 75812681 | 77837260 | 3 | 3 | 1.0e-08 | 3.0e-10 | 3.7e-10 | 1 | AP3B1 LOC728723 PDE8B |
52 | 5 | 101392473 | 103244640 | 3 | 2 | 3.7e-16 | 6.0e-16 | 1.0e+00 | 100 | PAM |
53 | 5 | 112152920 | 113626035 | 1 | 1 | 2.2e-08 | 5.2e-08 | 6.1e-01 | 99 | YTHDC2 |
54 | 5 | 117683871 | 119434193 | 2 | 1 | 3.0e-22 | 9.5e-17 | 8.6e-01 | 100 | TNFAIP8 |
55 | 5 | 126587995 | 128116643 | 2 | 1 | 7.9e-15 | 1.6e-13 | 1.0e+00 | 100 | FLJ33630 |
56 | 5 | 131699867 | 133140038 | 5 | 1 | 1.2e-16 | 5.5e-16 | 1.0e+00 | 100 | HSPA4 |
57 | 5 | 137076207 | 138474788 | 2 | 1 | 8.1e-11 | 5.9e-11 | 1.0e+00 | 100 | REEP2 |
58 | 5 | 138844599 | 140784895 | 2 | 2 | 2.4e-08 | 1.2e-06 | 1.6e-03 | 58 | PURA ZMAT2 |
59 | 5 | 141453291 | 143303771 | 1 | 1 | 4.2e-08 | 5.9e-15 | 9.0e-13 | 16 | ARHGAP26 |
60 | 5 | 147825590 | 150635429 | 2 | 2 | 2.0e-09 | 2.4e-10 | 6.5e-04 | 71 | ABLIM3 NDST1 |
61 | 5 | 171053425 | 172577403 | 1 | 1 | 1.1e-08 | 1.7e-10 | 3.8e-03 | 80 | SH3PXD2B |
62 | 5 | 172620700 | 174088123 | 2 | 1 | 1.4e-39 | 1.3e-41 | 1.0e+00 | 100 | CPEB4 |
63 | 5 | 175662866 | 177260129 | 5 | 6 | 6.6e-26 | 5.9e-31 | NaN | NaN | FGFR4 MXD3 RAB24 |
64 | 5 | 177789202 | 179203479 | 1 | 1 | 6.1e-08 | 3.8e-08 | 1.0e+00 | 100 | ZNF354C |
65 | 6 | 6410663 | 7951067 | 1 | 1 | 5.1e-10 | 6.9e-53 | 5.7e-49 | 8 | RREB1 |
66 | 6 | 19703618 | 21930988 | 2 | 1 | 2.8e-08 | 1.6e-08 | 7.5e-03 | 78 | E2F3 |
67 | 6 | 33745071 | 35549670 | 4 | 1 | 3.4e-16 | 3.6e-40 | 2.6e-45 | -13 | C6orf106 |
68 | 6 | 41005502 | 44428506 | 9 | 5 | 2.5e-17 | 9.4e-150 | 3.7e-128 | 15 | CRIP3 DNPH1 PGC RP1-261G23.7 |
69 | 6 | 79927081 | 81872212 | 6 | 5 | 1.4e-16 | 2.5e-23 | 1.9e-04 | 86 | ELOVL4 RP11-250B2.3 RP11-250B2.5 RP11-250B2.6 |
70 | 6 | 125583672 | 128307725 | 5 | 4 | 2.8e-118 | 4.8e-92 | 4.2e-04 | 97 | CENPW HINT3 RSPO3 |
71 | 6 | 129638583 | 131163098 | 2 | 1 | 6.0e-21 | 1.2e-18 | 1.4e-01 | 97 | L3MBTL3 |
72 | 6 | 132394840 | 133817456 | 1 | 1 | 1.5e-07 | 5.0e-12 | 8.8e-11 | 12 | SLC18B1 |
73 | 6 | 159843841 | 161786694 | 4 | 4 | 1.8e-18 | 2.3e-30 | 4.0e-04 | 90 | LPAL2 SLC22A3 |
74 | 7 | 25516629 | 28468319 | 8 | 4 | 1.1e-43 | 1.3e-42 | 1.0e+00 | 100 | AC004540.4 AC004540.5 HOXA9 JAZF1 |
75 | 7 | 32669532 | 33175874 | 1 | 1 | 2.6e-07 | 5.4e-08 | 8.1e-02 | 90 | KBTBD2 |
76 | 7 | 45066031 | 46658015 | 2 | 2 | 2.1e-11 | 1.7e-09 | 5.9e-06 | 43 | IGFBP3 SEPT7P2 |
77 | 7 | 71935903 | 73803303 | 6 | 1 | 5.6e-26 | 2.3e-24 | 1.0e+00 | 100 | MLXIPL |
78 | 7 | 76058767 | 78122616 | 8 | 2 | 2.1e-26 | 1.4e-22 | 3.2e-01 | 99 | FGL2 RSBN1L |
79 | 8 | 70788124 | 72974329 | 4 | 6 | 1.7e-13 | 7.3e-32 | NaN | NaN | EYA1 LACTB2 TRAM1 XKR9 |
80 | 8 | 88801153 | 89582625 | 1 | 1 | 2.0e-14 | 1.1e-14 | 1.0e-01 | 96 | MMP16 |
81 | 8 | 120186415 | 121760704 | 1 | 1 | 4.5e-08 | 4.8e-11 | 2.3e-07 | 38 | DEPTOR |
82 | 8 | 144462169 | 145856021 | 2 | 2 | 1.3e-07 | 7.4e-07 | 5.8e-03 | 69 | KIAA1875 MAF1 |
83 | 9 | 93284804 | 96338382 | 9 | 2 | 6.7e-19 | 1.5e-19 | 1.5e-02 | 93 | AUH IPPK |
84 | 9 | 101461090 | 102081250 | 1 | 1 | 1.1e-09 | 8.6e-09 | 1.8e-02 | 83 | COL15A1 |
85 | 9 | 106828404 | 108380721 | 2 | 3 | 7.8e-19 | 3.6e-33 | 2.8e-26 | 22 | ABCA1 NIPSNAP3B |
86 | 9 | 110998007 | 112581047 | 5 | 1 | 6.0e-10 | 3.6e-10 | 4.0e-04 | 68 | C9orf5 |
87 | 9 | 112938178 | 114495615 | 1 | 2 | 5.5e-16 | 9.7e-17 | 9.3e-03 | 90 | LPAR1 |
88 | 9 | 127218258 | 128824378 | 4 | 1 | 5.6e-12 | 1.9e-08 | 5.4e-06 | 34 | PPP6C |
89 | 9 | 130884753 | 132289479 | 2 | 1 | 2.9e-08 | 2.4e-08 | 3.4e-02 | 86 | ENDOG |
90 | 9 | 136302683 | 137724371 | 1 | 1 | 3.7e-09 | 1.6e-09 | 1.4e-10 | -13 | WDR5 |
91 | 10 | 4129296 | 5953148 | 5 | 3 | 1.5e-15 | 4.1e-13 | 6.9e-01 | 100 | AKR1C2 AKR1E2 ASB13 |
92 | 10 | 27265641 | 28731618 | 2 | 1 | 5.0e-12 | 4.2e-12 | 6.2e-02 | 93 | MKX |
93 | 10 | 31857752 | 33353843 | 1 | 1 | 1.4e-11 | 3.5e-14 | 3.9e-04 | 78 | EPC1 |
94 | 10 | 76465803 | 79018276 | 2 | 2 | 1.5e-08 | 1.7e-10 | 1.8e-02 | 86 | C10orf11 ZNF503-AS2 |
95 | 10 | 80130592 | 81901722 | 2 | 2 | 5.1e-11 | 2.3e-19 | 2.6e-14 | 28 | ZCCHC24 ZMIZ1 |
96 | 10 | 93730592 | 96818402 | 4 | 3 | 2.9e-13 | 7.6e-11 | 5.4e-01 | 99 | EIF2S2P3 FFAR4 NOC3L |
97 | 10 | 103527782 | 105275242 | 3 | 1 | 4.4e-10 | 9.4e-09 | 4.3e-01 | 98 | TRIM8 |
98 | 10 | 114018656 | 115622375 | 2 | 2 | 1.9e-18 | 1.4e-24 | 3.0e-03 | 92 | RP11-57H14.2 TCF7L2 |
99 | 11 | 198510 | 1613255 | 19 | 1 | 2.5e-18 | 1.0e-17 | 6.1e-02 | 95 | AP006621.6 |
100 | 11 | 8233876 | 11627021 | 9 | 5 | 6.9e-19 | 1.1e-18 | 4.0e-01 | 99 | ADM AKIP1 AMPD3 ZBED5-AS1 ZNF143 |
101 | 11 | 13608389 | 15606722 | 3 | 1 | 7.3e-14 | 9.7e-12 | 5.2e-02 | 92 | RRAS2 |
102 | 11 | 16709350 | 18106069 | 2 | 1 | 1.0e-07 | 8.1e-08 | 1.0e+00 | 100 | KCNJ11 |
103 | 11 | 32208950 | 32707915 | 1 | 1 | 1.1e-07 | 1.2e-11 | 2.3e-05 | 61 | WIT1 |
104 | 11 | 36068766 | 36732916 | 1 | 1 | 1.6e-09 | 1.3e-10 | 2.5e-02 | 88 | PRR5L |
105 | 11 | 46622392 | 48783497 | 3 | 1 | 3.9e-09 | 1.3e-08 | 2.1e-02 | 84 | PTPRJ |
106 | 11 | 56614663 | 58010711 | 1 | 1 | 1.5e-07 | 4.9e-08 | 2.8e-04 | 56 | SMTNL1 |
107 | 11 | 61627881 | 63284510 | 13 | 3 | 8.1e-28 | 2.7e-25 | 2.3e-01 | 99 | ASRGL1 EEF1G EML3 |
108 | 11 | 63305184 | 70179848 | 34 | 21 | 2.1e-33 | 3.6e-29 | NaN | NaN | BANF1 CCDC88B DNAJC4 KAT5 MYEOV ORAOV1 PACS1 PPP6R3 PRDX5 RAD9A RP11-554A11.9 TBX10 VEGFB |
109 | 11 | 74057931 | 74581213 | 1 | 1 | 2.9e-09 | 2.9e-08 | 8.3e-01 | 100 | POLD3 |
110 | 11 | 110526172 | 112794647 | 14 | 7 | 2.3e-32 | 1.4e-32 | NaN | NaN | ALG9 CRYAB DLAT PIH1D2 PPP2R1B |
111 | 12 | 25589747 | 28607631 | 6 | 11 | 4.7e-24 | 6.7e-51 | 4.1e-18 | 67 | BHLHE41 MRPS35 RP11-283G6.5 SSPN STK38L |
112 | 12 | 30084002 | 31526510 | 1 | 1 | 7.7e-12 | 1.3e-11 | 2.2e-01 | 97 | IPO8 |
113 | 12 | 33480976 | 34826574 | 1 | 1 | 9.6e-12 | 1.9e-12 | 1.0e+00 | 100 | ALG10 |
114 | 12 | 53353508 | 55370164 | 11 | 9 | 8.1e-25 | 7.8e-45 | NaN | NaN | ATP5G2 FLJ12825 HNRNPA1 HOTAIR HOXC11 HOXC6 LOC100240734 |
115 | 12 | 55389667 | 57844049 | 2 | 2 | 1.0e-11 | 2.8e-11 | 1.0e+00 | 100 | ITGA7 PRIM1 |
116 | 12 | 65998561 | 67434487 | 1 | 1 | 5.0e-08 | 1.7e-19 | 5.0e-15 | 25 | HELB |
117 | 12 | 101713020 | 103148974 | 3 | 1 | 4.0e-08 | 4.0e-08 | 1.0e+00 | 100 | CCDC53 |
118 | 12 | 106649988 | 108046218 | 3 | 1 | 2.0e-15 | 5.0e-13 | 8.7e-01 | 100 | RIC8B |
119 | 12 | 111645043 | 114435061 | 2 | 2 | 2.1e-08 | 1.3e-12 | 1.3e-08 | 36 | ADAM1A TPCN1 |
120 | 12 | 122258047 | 125270773 | 33 | 16 | 4.2e-149 | 3.6e-87 | NaN | NaN | ABCB9 ATP6V0A2 C12orf65 CCDC92 DNAH10 GPR109A GPR109B MLXIP RP11-380L11.3 RSRC2 SETD8 ZCCHC8 |
121 | 13 | 21547317 | 22977789 | 1 | 1 | 1.4e-08 | 3.1e-11 | 1.8e-04 | 68 | FGF9 |
122 | 13 | 49123516 | 52223199 | 3 | 4 | 3.0e-12 | 2.1e-40 | 4.3e-24 | 42 | CDADC1 EBPL RNASEH2B |
123 | 13 | 100493160 | 101426949 | 1 | 1 | 3.7e-08 | 1.3e-08 | 5.6e-03 | 76 | PCCA |
124 | 14 | 51775331 | 53232305 | 2 | 2 | 4.9e-09 | 3.1e-10 | 1.4e-05 | 52 | C14orf166 NID2 |
125 | 14 | 57770476 | 59538065 | 4 | 1 | 2.6e-14 | 5.4e-14 | 2.6e-01 | 98 | AL132989.1 |
126 | 14 | 70676661 | 72273020 | 1 | 1 | 4.1e-08 | 1.2e-08 | 7.3e-02 | 90 | PCNX |
127 | 14 | 90643934 | 92390620 | 2 | 1 | 1.1e-28 | 7.1e-29 | 1.0e+00 | 100 | RPS6KA5 |
128 | 15 | 30930500 | 32198339 | 1 | 1 | 6.2e-10 | 2.4e-17 | 1.8e-12 | 31 | RP11-16E12.1 |
129 | 15 | 39955786 | 42957373 | 11 | 4 | 1.9e-14 | 1.8e-11 | 2.6e-03 | 80 | DISP2 PLA2G4B RP11-64K12.8 |
130 | 15 | 55687969 | 57448455 | 3 | 1 | 2.2e-19 | 2.4e-17 | 1.8e-01 | 98 | TEX9 |
131 | 15 | 63142203 | 64806348 | 2 | 1 | 4.2e-11 | 6.9e-11 | 2.6e-02 | 88 | HERC1 |
132 | 15 | 66797492 | 68789191 | 3 | 1 | 8.7e-11 | 1.6e-12 | 1.9e-03 | 81 | IQCH |
133 | 15 | 73604139 | 76589495 | 5 | 2 | 2.4e-11 | 2.6e-10 | 7.0e-05 | 60 | SNUPN STOML1 |
134 | 15 | 84157360 | 85728820 | 7 | 2 | 3.7e-14 | 1.4e-08 | 3.1e-02 | 86 | RP11-182J1.14 ZSCAN2 |
135 | 15 | 98493891 | 100972747 | 2 | 2 | 1.1e-08 | 1.7e-10 | 9.0e-04 | 73 | IGF1R LYSMD4 |
136 | 16 | 1994980 | 2488693 | 1 | 1 | 1.2e-07 | 3.0e-08 | 3.1e-02 | 85 | CASKIN1 |
137 | 16 | 2705523 | 5281856 | 14 | 11 | 1.3e-22 | 7.3e-26 | NaN | NaN | NLRC3 NMRAL1 PAM16 RP11-95P2.1 TIGD7 |
138 | 16 | 10341141 | 12426645 | 2 | 2 | 1.4e-07 | 2.3e-09 | 4.3e-08 | 16 | LITAF RP11-876N24.5 |
139 | 16 | 52772129 | 54235440 | 2 | 1 | 5.5e-12 | 1.7e-11 | 4.2e-01 | 99 | RBL2 |
140 | 16 | 66542957 | 69084178 | 19 | 2 | 7.4e-12 | 1.2e-11 | 9.0e-01 | 100 | HSD11B2 SLC7A6 |
141 | 17 | 3587 | 993600 | 1 | 1 | 1.2e-11 | 6.5e-05 | 2.4e-01 | 91 | FAM101B |
142 | 17 | 3208350 | 4966954 | 2 | 1 | 2.6e-08 | 2.2e-08 | 1.0e+00 | 100 | ZZEF1 |
143 | 17 | 6247468 | 8535817 | 17 | 5 | 8.3e-15 | 8.5e-18 | 4.0e-01 | 99 | FGF11 KCNAB3 SLC16A11 TNFSF12 YBX2 |
144 | 17 | 15610167 | 16127206 | 1 | 1 | 1.1e-07 | 1.5e-06 | 7.1e-01 | 99 | ADORA2B |
145 | 17 | 16718225 | 18923818 | 26 | 3 | 3.4e-26 | 1.5e-22 | 1.0e-01 | 97 | ALKBH5 CCDC144B RASD1 |
146 | 17 | 36211659 | 37644854 | 2 | 1 | 3.1e-08 | 3.1e-08 | 1.0e+00 | 100 | PSMB3 |
147 | 17 | 39262753 | 41865627 | 16 | 4 | 2.6e-21 | 1.5e-14 | 1.3e-01 | 96 | FKBP10 HSD17B1P1 IFI35 RP11-400F19.6 |
148 | 17 | 42774693 | 45796313 | 22 | 10 | 3.6e-31 | 1.1e-21 | 1.0e+00 | 100 | KANSL1 LRRC37A LRRC37A2 LRRC37A4P MAPT MGC57346 WNT3 |
149 | 17 | 46303558 | 48139500 | 2 | 1 | 3.2e-09 | 1.5e-09 | 1.0e+00 | 100 | ZNF652 |
150 | 17 | 58828402 | 60172573 | 3 | 1 | 5.1e-29 | 1.4e-24 | 6.9e-01 | 100 | C17orf82 |
151 | 17 | 61106371 | 62694738 | 5 | 1 | 4.7e-10 | 1.2e-09 | 1.0e+00 | 100 | CD79B |
152 | 17 | 64675899 | 66391314 | 1 | 1 | 7.8e-13 | 2.7e-12 | 3.4e-01 | 98 | PITPNC1 |
153 | 17 | 67467957 | 68868764 | 1 | 2 | 4.7e-19 | 2.5e-32 | 7.6e-11 | 70 | KCNJ2 |
154 | 17 | 72503355 | 74934536 | 9 | 2 | 1.4e-19 | 3.9e-17 | 1.0e-02 | 91 | RNF157 SLC25A19 |
155 | 17 | 76126204 | 76715561 | 2 | 1 | 3.2e-14 | 2.3e-11 | 4.0e-01 | 98 | PGS1 |
156 | 17 | 79237900 | 80694826 | 7 | 1 | 7.4e-10 | 5.3e-09 | 2.0e-01 | 95 | LRRC45 |
157 | 18 | 2148968 | 3615632 | 1 | 1 | 1.9e-23 | 3.2e-30 | 2.7e-08 | 76 | EMILIN2 |
158 | 18 | 20082830 | 21713136 | 1 | 1 | 2.5e-07 | 2.7e-16 | 1.0e-10 | 38 | TMEM241 |
159 | 18 | 33665455 | 35503998 | 4 | 1 | 1.1e-09 | 6.9e-07 | 4.8e-02 | 84 | C18orf10 |
160 | 18 | 45873080 | 47686517 | 1 | 1 | 2.3e-08 | 7.5e-12 | 3.7e-07 | 45 | DYM |
161 | 19 | 1400866 | 2923263 | 2 | 1 | 5.4e-13 | 2.0e-13 | 1.0e+00 | 100 | DOT1L |
162 | 19 | 10283932 | 11873382 | 2 | 1 | 3.5e-09 | 2.8e-09 | 3.0e-04 | 63 | CARM1 |
163 | 19 | 12365196 | 13750618 | 1 | 1 | 4.4e-10 | 9.5e-12 | 2.9e-05 | 62 | CTC-425F1.4 |
164 | 19 | 16462417 | 19374068 | 19 | 11 | 6.8e-41 | 3.8e-39 | NaN | NaN | AC005253.2 CTD-3032J10.3 ELL IL12RB1 JUND KIAA1683 PDE4C PGPEP1 |
165 | 19 | 32670184 | 34959979 | 8 | 9 | 8.4e-69 | 3.2e-60 | NaN | NaN | CEBPA CEP89 CTD-2085J24.4 GPATCH1 PEPD |
166 | 19 | 40705360 | 41195279 | 1 | 1 | 2.3e-07 | 2.2e-06 | 2.2e-04 | 39 | SERTAD3 |
167 | 19 | 42591484 | 43175294 | 2 | 1 | 2.4e-08 | 1.9e-07 | 8.3e-01 | 100 | LIPE |
168 | 19 | 45496303 | 46994833 | 2 | 2 | 6.8e-08 | 2.7e-07 | 1.2e-01 | 91 | DMWD SNRPD2 |
169 | 19 | 48464978 | 49935001 | 5 | 1 | 2.0e-09 | 2.4e-09 | 3.4e-01 | 98 | FUT2 |
170 | 19 | 55324635 | 56723492 | 2 | 1 | 1.9e-11 | 2.0e-08 | 5.6e-01 | 99 | SSC5D |
171 | 20 | 32594714 | 34795372 | 15 | 7 | 3.7e-19 | 4.1e-22 | NaN | NaN | CEP250 EDEM2 GDF5 PROCR UQCC UQCC1 |
172 | 20 | 39270768 | 40683594 | 4 | 1 | 6.6e-13 | 9.6e-15 | 2.2e-06 | 63 | PRO0628 |
173 | 20 | 44824099 | 46516716 | 1 | 2 | 7.9e-46 | 1.0e-50 | 1.2e-07 | 88 | EYA2 |
174 | 20 | 55887723 | 56390585 | 1 | 1 | 1.3e-08 | 1.1e-11 | 2.1e-04 | 70 | PCK1 |
175 | 20 | 61989111 | 62912463 | 4 | 1 | 4.2e-16 | 2.7e-16 | 1.3e-01 | 97 | RGS19 |
176 | 21 | 38835811 | 40373763 | 2 | 1 | 2.3e-17 | 1.5e-18 | 1.1e-02 | 92 | DSCR10 |
177 | 21 | 46820082 | 48090629 | 1 | 1 | 2.2e-08 | 6.6e-11 | 2.3e-04 | 68 | COL6A2 |
178 | 22 | 28387749 | 32756899 | 19 | 15 | 1.3e-17 | 2.4e-32 | NaN | NaN | C22orf31 CCDC157 CHEK2 GATSL3 MTFP1 RNF185 RP1-130H16.16 THOC5 ZNRF3 |
179 | 22 | 34997079 | 36442122 | 2 | 1 | 4.9e-11 | 4.5e-11 | 2.6e-01 | 97 | TOM1 |
180 | 22 | 38359667 | 40571499 | 3 | 2 | 1.3e-07 | 1.0e-07 | 1.0e+00 | 100 | CBY1 MGAT3 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Adipose Visceral Omentum | 71 | 3.5 | 5.7 |
GTEx | Ovary | 34 | 3.7 | 5.6 |
GTEx | Small Intestine Terminal Ileum | 22 | 4.8 | 5.5 |
GTEx | Adipose Subcutaneous | 118 | 3.4 | 5.2 |
GTEx | Prostate | 28 | 3.4 | 5.2 |
GTEx | Breast Mammary Tissue (Male) | 42 | 3.5 | 5.1 |
GTEx | Colon Sigmoid | 47 | 3.2 | 5.1 |
GTEx | Colon Transverse | 70 | 3.4 | 5.1 |
GTEx | Heart Atrial Appendage | 48 | 3.0 | 5.1 |
GTEx | Heart Left Ventricle | 57 | 3.7 | 5.1 |
GTEx | Spleen | 53 | 3.8 | 5.1 |
GTEx | Lung | 92 | 3.2 | 5.0 |
GTEx | Pancreas | 57 | 3.5 | 5.0 |
GTEx | Stomach | 58 | 4.0 | 5.0 |
GTEx | Vagina | 18 | 2.8 | 5.0 |
GTEx | Brain Frontal Cortex BA9 | 35 | 3.8 | 4.9 |
GTEx | Brain Putamen basal ganglia | 21 | 3.4 | 4.9 |
GTEx | Breast Mammary Tissue | 68 | 3.4 | 4.9 |
GTEx | Breast Mammary Tissue (Female) | 53 | 3.2 | 4.9 |
GTEx | Cells EBV-transformed lymphocytes | 46 | 3.2 | 4.9 |
GTEx | Cells Transformed fibroblasts | 144 | 3.4 | 4.9 |
GTEx | Skin Sun Exposed Lower leg | 115 | 3.2 | 4.9 |
GTEx | Thyroid | 129 | 3.2 | 4.9 |
GTEx | Brain Hypothalamus | 16 | 2.7 | 4.8 |
GTEx | Esophagus Gastroesophageal Junction | 47 | 3.3 | 4.8 |
GTEx | Esophagus Mucosa | 112 | 3.4 | 4.8 |
GTEx | Pituitary | 36 | 3.2 | 4.8 |
METSIM | Adipose | 129 | 2.8 | 4.8 |
GTEx | Artery Coronary | 38 | 3.2 | 4.7 |
GTEx | Artery Tibial | 113 | 3.0 | 4.7 |
GTEx | Brain Cortex | 26 | 2.5 | 4.7 |
GTEx | Brain Hippocampus | 15 | 2.9 | 4.7 |
GTEx | Brain Nucleus accumbens basal ganglia | 25 | 2.9 | 4.7 |
GTEx | Esophagus Muscularis | 109 | 3.4 | 4.7 |
GTEx | Muscle Skeletal | 87 | 3.0 | 4.7 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 36 | 3.4 | 4.7 |
GTEx | Artery Aorta | 93 | 3.1 | 4.6 |
GTEx | Brain Caudate basal ganglia | 23 | 2.5 | 4.6 |
GTEx | Brain Cerebellum | 61 | 3.1 | 4.6 |
GTEx | Liver | 22 | 3.1 | 4.6 |
GTEx | Nerve Tibial | 140 | 3.2 | 4.6 |
GTEx | Skin Not Sun Exposed Suprapubic | 73 | 3.0 | 4.6 |
GTEx | Uterus | 18 | 3.2 | 4.6 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 32 | 2.9 | 4.6 |
GTEx | Testis | 90 | 2.9 | 4.5 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 25 | 2.4 | 4.5 |
GTEx | Adrenal Gland | 39 | 2.7 | 4.4 |
GTEx | Brain Cerebellar Hemisphere | 39 | 2.6 | 4.4 |
GTEx | Whole Blood | 58 | 2.9 | 4.4 |
ROSMAP | Brain Pre-frontal Cortex | 121 | 2.8 | 4.4 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 49 | 3.0 | 4.4 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 55 | 3.3 | 4.4 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 117 | 2.6 | 4.3 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 56 | 2.7 | 4.3 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 48 | 3.0 | 4.3 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 46 | 2.7 | 4.3 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 74 | 2.7 | 4.2 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 118 | 2.7 | 4.2 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 57 | 2.3 | 4.2 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 52 | 2.5 | 4.1 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 27 | 2.4 | 4.1 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 13 | 2.4 | 4.1 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 38 | 3.0 | 4.1 |
YFS | Blood | 113 | 2.4 | 4.0 |
The Cancer Genome Atlas | Esophageal Carcinoma | 17 | 2.5 | 4.0 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 95 | 2.3 | 4.0 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 31 | 2.3 | 4.0 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 114 | 2.5 | 4.0 |
The Cancer Genome Atlas | Thyroid Carcinoma | 118 | 2.3 | 4.0 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 11 | 2.1 | 4.0 |
NTR | Blood | 55 | 2.3 | 3.9 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 71 | 2.4 | 3.9 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 15 | 2.2 | 3.9 |
CommonMind | Brain Pre-frontal Cortex | 113 | 2.1 | 3.8 |