TWAS
hub
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Usage
Models
Genes
Traits
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Traits
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Blood White Count
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chr5:117,683,871-119,434,193
Best TWAS P=2.48e-15 · Best GWAS P=4.48e-16 conditioned to 1.77e-05
117.6M
117.8M
118M
118.2M
118.4M
118.6M
118.8M
119M
119.2M
119.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Uterus
DMXL1
0.40
-0.01
lasso
8
0.02
1.1e-01
-3.3
-7.9
2.5e-15
0.59
0.04
0.37
TRUE
3
The Cancer Genome Atlas
Cervical Squamous Cell Carcinoma
TNFAIP8
0.23
0.02
blup
111
0.06
4.8e-04
5.9
5.6
1.8e-08
-0.10
0.10
0.04
FALSE
1
GTEx
Cells Transformed fibroblasts
TNFAIP8
0.21
0.12
lasso
6
0.14
8.2e-11
1.9
-5.2
2.5e-07
0.67
0.23
0.77
FALSE