Best TWAS P=8.07e-12 · Best GWAS P=6.22e-10 conditioned to 0.886
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | PTK2B | 0.03 | 0.02 | lasso | 2 | 0.02 | 2.1e-07 | -6.2 | -6.3 | 2.1e-10 | 1.00 | 0 | 1 | FALSE |
2 | YFS | Blood | PTK2B | 0.09 | 0.08 | lasso | 5 | 0.09 | 7.8e-28 | -6.2 | -6.8 | 8.1e-12 | 0.89 | 0 | 1 | TRUE |