TWAS
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Models
Genes
Traits
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Traits
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Blood White Count
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chr1:158,332,431-159,875,455
Best TWAS P=4.27e-11 · Best GWAS P=7.3e-14 conditioned to 8.2e-07
158.4M
158.6M
158.8M
159M
159.2M
159.4M
159.6M
159.8M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
SPTA1
0.03
0.01
blup
93
0.02
2.4e-03
-5.4
-6.6
4.3e-11
-0.60
0.12
0.27
TRUE
1
YFS
Blood
DARC
0.26
0.20
lasso
7
0.20
6.7e-65
-6.0
6.1
9.2e-10
-0.06
0.00
1.00
TRUE