TWAS
hub
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Usage
Models
Genes
Traits
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Traits
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Blood White Count
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chr13:28,177,866-29,765,897
Best TWAS P=5.26e-23 · Best GWAS P=6.18e-26 conditioned to 5.5e-09
28.2M
28.4M
28.6M
28.8M
29M
29.2M
29.4M
29.6M
29.8M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Colon Sigmoid
FLT1
0.39
0.05
lasso
9
0.05
9.2e-03
-9.2
-9.9
5.3e-23
0.59
0.20
0.35
TRUE
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
FLT3
0.04
0.04
lasso
1
0.04
2.1e-05
-9.2
-9.2
4.1e-20
0.58
0.62
0.10
FALSE
3
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
FLT3
0.10
0.06
lasso
3
0.09
8.0e-06
-9.4
-7.8
6.4e-15
0.63
0.23
0.57
FALSE
4
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
FLT3
0.12
0.06
blup
96
0.06
2.4e-03
-9.3
-7.2
5.2e-13
0.66
0.09
0.66
FALSE