TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
←
→
chr16:56,330,832-57,810,318
Best TWAS P=2.99e-16 · Best GWAS P=2.8e-16 conditioned to 1
56.4M
56.6M
56.8M
57M
57.2M
57.4M
57.6M
57.8M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
NTR
Blood
NLRC5
0.05
0.03
lasso
3
0.03
5.1e-09
8.2
8.2
3.0e-16
0.96
0
1.00
TRUE
1
GTEx
Whole Blood
NLRC5
0.18
0.09
enet
17
0.12
6.9e-11
8.2
6.8
1.3e-11
0.84
0
1.00
FALSE
4
The Cancer Genome Atlas
Colon Adenocarcinoma
CETP
0.11
0.03
blup
90
0.05
1.2e-03
8.2
6.0
2.2e-09
0.56
0
0.97
FALSE
3
YFS
Blood
NLRC5
0.22
0.07
bslmm
564
0.17
9.0e-52
8.2
5.6
1.9e-08
0.56
0
1.00
FALSE