TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
←
→
chr16:83,903,941-85,341,713
Best TWAS P=1.21e-10 · Best GWAS P=2.2e-34 conditioned to 1.44e-25
84M
84.2M
84.4M
84.6M
84.8M
85M
85.2M
85.4M
0
10
20
30
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
COTL1
0.23
0.02
lasso
7
0.03
2.3e-03
5.0
-6.4
1.2e-10
-0.45
0.16
0.44
TRUE
2
GTEx
Artery Tibial
COTL1
0.23
0.13
lasso
4
0.13
2.7e-10
6.2
-6.0
2.5e-09
-0.27
1.00
0.00
FALSE
4
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
COTL1
0.12
0.00
blup
135
0.02
7.8e-03
0.1
-5.6
2.3e-08
-0.31
0.04
0.08
FALSE
3
METSIM
Adipose
COTL1
0.13
0.13
enet
16
0.13
1.4e-18
5.4
-5.4
7.0e-08
-0.27
1.00
0.00
FALSE