TWAS
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Models
Genes
Traits
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Traits
:
Blood White Count
:
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chr2:143,154,021-145,209,076
Best TWAS P=2.78e-20 · Best GWAS P=6.44e-27 conditioned to 1.22e-09
143.5M
144M
144.5M
145M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
YFS
Blood
ARHGAP15
0.23
0.09
bslmm
557
0.21
1.2e-65
-10.7423
9.2
2.8e-20
-0.68
0.00
1.00
TRUE
1
NTR
Blood
ARHGAP15
0.06
0.02
blup
565
0.04
6.3e-14
0.0024
6.5
9.1e-11
-0.43
0.95
0.05
FALSE
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
KYNU
0.07
0.01
blup
95
0.03
1.5e-04
-1.2791
-5.8
5.2e-09
0.44
0.02
0.87
FALSE