Best TWAS P=2.78e-20 · Best GWAS P=6.44e-27 conditioned to 1.22e-09
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | ARHGAP15 | 0.06 | 0.02 | blup | 565 | 0.04 | 6.3e-14 | 0.0024 | 6.5 | 9.1e-11 | -0.43 | 0.95 | 0.05 | FALSE |
| 2 | YFS | Blood | ARHGAP15 | 0.23 | 0.09 | bslmm | 557 | 0.21 | 1.2e-65 | -10.7423 | 9.2 | 2.8e-20 | -0.68 | 0.00 | 1.00 | TRUE |
| 3 | The Cancer Genome Atlas | Brain Lower Grade Glioma | KYNU | 0.07 | 0.01 | blup | 95 | 0.03 | 1.5e-04 | -1.2791 | -5.8 | 5.2e-09 | 0.44 | 0.02 | 0.87 | FALSE |