TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood White Count
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chr3:11,829,474-13,608,348
Best TWAS P=1.71e-10 · Best GWAS P=3.77e-33 conditioned to 3.33e-22
11.8M
12M
12.2M
12.4M
12.6M
12.8M
13M
13.2M
13.4M
13.6M
0
10
20
30
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
METSIM
Adipose
TSEN2
0.06
0.02
enet
30
0.06
9.3e-10
-8.0
6.4
1.7e-10
-0.57
0.48
0.51
TRUE
2
GTEx
Nerve Tibial
MKRN2
0.12
0.00
enet
41
0.00
3.0e-01
-2.8
5.4
5.7e-08
-0.08
0.18
0.15
TRUE
1
GTEx
Cells Transformed fibroblasts
CAND2
0.34
0.08
lasso
14
0.13
8.1e-10
-3.2
-5.9
4.3e-09
0.40
0.76
0.19
FALSE