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chr9:108,998-1,162,143

Best TWAS P=6.8e-34 · Best GWAS P=9.85e-58 conditioned to 1.53e-29

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
7	GTEx	Stomach	XXyac-YRM2039.2	0.18	0.01	enet	24	0.05	1.6e-03	-8.563	12.1	6.8e-34	-0.39	0.04	0.60	TRUE
8	ROSMAP	Brain Pre-frontal Cortex	FOXD4	0.24	0.05	blup	371	0.13	7.9e-17	0.037	9.7	4.7e-22	-0.28	1.00	0.00	TRUE
1	CommonMind	Brain Pre-frontal Cortex	FOXD4	0.13	0.04	lasso	6	0.05	9.9e-07	0.037	5.7	1.4e-08	-0.31	1.00	0.00	TRUE
2	GTEx	Artery Coronary	CBWD1	0.35	0.12	enet	12	0.17	2.7e-06	-14.442	10.9	1.1e-27	-0.65	0.32	0.44	FALSE
6	GTEx	Pancreas	DOCK8	0.39	0.24	lasso	7	0.26	1.5e-11	-8.802	-9.8	1.9e-22	0.44	1.00	0.00	FALSE
3	GTEx	Brain Cortex	DOCK8	0.22	0.05	lasso	5	0.04	3.2e-02	2.921	8.8	8.9e-19	-0.49	0.15	0.16	FALSE
5	GTEx	Liver	CBWD1	0.30	0.00	lasso	4	0.04	3.4e-02	2.986	7.9	2.3e-15	-0.53	0.14	0.07	FALSE
9	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	C9orf66	0.05	0.04	lasso	4	0.04	1.0e-05	3.601	-5.7	1.4e-08	0.35	0.02	0.97	FALSE
4	GTEx	Brain Hippocampus	CBWD1	0.23	0.04	enet	21	0.01	1.5e-01	3.332	5.5	3.4e-08	-0.57	0.11	0.38	FALSE