TWAS
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Traits
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Traits
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Blood Platelet Count
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chr20:36,061,623-37,493,761
Best TWAS P=6.57e-10 · Best GWAS P=1.37e-09 conditioned to 0.101
36M
36.2M
36.4M
36.6M
36.8M
37M
37.2M
37.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
METSIM
Adipose
TGM2
0.09
0.05
enet
12
0.07
2.2e-10
4.4
6.2
6.6e-10
0.83
0.02
0.98
TRUE
3
The Cancer Genome Atlas
Thyroid Carcinoma
TGM2
0.04
0.04
lasso
2
0.04
1.8e-04
4.9
5.7
1.4e-08
0.70
0.02
0.97
FALSE
1
GTEx
Nerve Tibial
TGM2
0.13
0.05
lasso
3
0.04
4.9e-04
4.0
5.5
4.4e-08
0.76
0.01
0.98
FALSE