Best TWAS P=4.4e-63 · Best GWAS P=3.56e-62 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | E2F1 | 0.06 | 0.01 | bslmm | 268 | 0.02 | 1.6e-03 | 6.4 | -6.0 | 2.4e-09 | -0.04 | 0.08 | 0.52 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FAM182B | 0.77 | 0.48 | enet | 37 | 0.63 | 4.9e-99 | 2.9 | 5.7 | 1.0e-08 | -0.06 | 1.00 | 0.00 | TRUE |
3 | CommonMind | Brain Pre-frontal Cortex | FRG1B | 0.15 | 0.11 | lasso | 5 | 0.11 | 1.4e-13 | -7.9 | -10.7 | 7.9e-27 | -0.36 | 1.00 | 0.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | GINS1 | 0.04 | 0.02 | blup | 356 | 0.04 | 3.6e-05 | 4.6 | 6.4 | 1.5e-10 | 0.04 | 0.19 | 0.78 | TRUE |
5 | CommonMind | Brain Pre-frontal Cortex | KIF3B | 0.07 | 0.05 | blup | 355 | 0.06 | 2.6e-07 | -3.3 | -5.5 | 4.5e-08 | -0.14 | 1.00 | 0.00 | TRUE |
6 | GTEx | Adipose Subcutaneous | ABHD12 | 0.09 | 0.01 | enet | 12 | 0.02 | 4.3e-03 | 5.7 | 5.1 | 2.7e-07 | 0.11 | 0.03 | 0.95 | FALSE |
7 | GTEx | Adipose Subcutaneous | COX4I2 | 0.09 | 0.11 | lasso | 3 | 0.11 | 5.3e-09 | -11.0 | -10.0 | 1.4e-23 | -0.02 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Subcutaneous | FRG1B | 0.06 | 0.04 | enet | 8 | 0.04 | 3.6e-04 | -4.9 | -6.9 | 5.4e-12 | -0.16 | 0.67 | 0.02 | FALSE |
9 | GTEx | Adipose Subcutaneous | RPL36P4 | 0.63 | 0.64 | enet | 17 | 0.66 | 7.4e-72 | 5.0 | 5.5 | 4.5e-08 | 0.02 | 0.01 | 0.99 | FALSE |
10 | GTEx | Adipose Subcutaneous | HM13-AS1 | 0.05 | 0.01 | lasso | 4 | 0.01 | 8.9e-02 | 0.3 | 5.7 | 1.1e-08 | 0.24 | 0.08 | 0.03 | FALSE |
11 | GTEx | Adipose Visceral Omentum | RPL36P4 | 0.40 | 0.37 | lasso | 7 | 0.38 | 4.6e-21 | 5.3 | 5.3 | 1.3e-07 | 0.02 | 0.01 | 0.99 | FALSE |
12 | GTEx | Adrenal Gland | FER1L4 | 0.17 | 0.10 | lasso | 9 | 0.11 | 1.2e-04 | 4.0 | -5.2 | 1.7e-07 | -0.02 | 0.16 | 0.57 | FALSE |
13 | GTEx | Adrenal Gland | RPL36P4 | 0.70 | 0.61 | enet | 17 | 0.62 | 7.6e-28 | 5.3 | 5.2 | 1.5e-07 | 0.01 | 0.01 | 0.99 | FALSE |
14 | GTEx | Artery Aorta | CBFA2T2 | 0.23 | 0.11 | enet | 13 | 0.18 | 4.5e-10 | 5.6 | -6.8 | 1.5e-11 | 0.02 | 0.10 | 0.90 | TRUE |
15 | GTEx | Artery Coronary | RPL36P4 | 0.64 | 0.46 | lasso | 5 | 0.50 | 5.8e-19 | 5.3 | 5.4 | 7.7e-08 | 0.01 | 0.01 | 0.99 | FALSE |
16 | GTEx | Artery Tibial | FRG1B | 0.03 | 0.02 | lasso | 5 | 0.03 | 3.1e-03 | -6.2 | -6.1 | 1.0e-09 | -0.16 | 0.20 | 0.03 | FALSE |
17 | GTEx | Artery Tibial | BAK1P1 | 0.08 | 0.03 | lasso | 2 | 0.06 | 1.4e-05 | -5.5 | -5.5 | 3.2e-08 | 0.04 | 0.23 | 0.11 | FALSE |
18 | GTEx | Brain Caudate basal ganglia | COX4I2 | 0.24 | 0.03 | lasso | 6 | 0.05 | 1.1e-02 | -9.1 | -10.0 | 1.2e-23 | -0.12 | 0.26 | 0.04 | FALSE |
19 | GTEx | Brain Caudate basal ganglia | RPL36P4 | 0.57 | 0.48 | lasso | 4 | 0.45 | 2.1e-14 | 5.3 | 5.3 | 1.1e-07 | 0.01 | 0.01 | 0.99 | FALSE |
20 | GTEx | Brain Cerebellar Hemisphere | FRG1B | 0.16 | 0.06 | enet | 14 | 0.11 | 1.1e-03 | -4.6 | -7.0 | 2.5e-12 | -0.24 | 0.05 | 0.24 | TRUE |
21 | GTEx | Brain Cerebellar Hemisphere | RPL36P4 | 0.36 | 0.26 | enet | 7 | 0.26 | 2.6e-07 | 5.3 | 5.6 | 2.0e-08 | 0.02 | 0.01 | 0.99 | FALSE |
22 | GTEx | Brain Frontal Cortex BA9 | RPL36P4 | 0.47 | 0.36 | lasso | 4 | 0.33 | 1.7e-09 | 5.3 | 5.5 | 3.6e-08 | 0.01 | 0.01 | 0.99 | FALSE |
23 | GTEx | Brain Hippocampus | E2F1 | 0.39 | 0.25 | lasso | 8 | 0.18 | 4.1e-05 | 6.0 | -6.0 | 2.0e-09 | 0.01 | 0.21 | 0.59 | FALSE |
24 | GTEx | Brain Nucleus accumbens basal ganglia | COX4I2 | 0.13 | 0.14 | lasso | 5 | 0.05 | 2.2e-02 | -11.6 | -11.2 | 6.5e-29 | -0.04 | 0.13 | 0.05 | FALSE |
25 | GTEx | Brain Nucleus accumbens basal ganglia | RPL36P4 | 0.71 | 0.53 | lasso | 8 | 0.49 | 3.8e-15 | 5.0 | 5.2 | 1.6e-07 | 0.02 | 0.01 | 0.99 | FALSE |
26 | GTEx | Brain Putamen basal ganglia | E2F1 | 0.18 | 0.22 | lasso | 6 | 0.21 | 1.2e-05 | 6.0 | -6.1 | 1.0e-09 | -0.01 | 0.30 | 0.41 | FALSE |
27 | GTEx | Breast Mammary Tissue | FRG1B | 0.06 | 0.03 | lasso | 4 | 0.02 | 3.4e-02 | 6.2 | 5.2 | 1.6e-07 | 0.17 | 0.08 | 0.05 | FALSE |
28 | GTEx | Breast Mammary Tissue | RPL36P4 | 0.70 | 0.49 | enet | 16 | 0.52 | 5.5e-31 | 5.0 | 5.3 | 8.9e-08 | 0.02 | 0.01 | 0.99 | FALSE |
29 | GTEx | Breast Mammary Tissue (Male) | RPL36P4 | 0.66 | 0.53 | lasso | 2 | 0.46 | 4.6e-12 | 5.0 | 5.2 | 1.6e-07 | 0.02 | 0.01 | 0.99 | FALSE |
30 | GTEx | Breast Mammary Tissue (Female) | RPL36P4 | 0.31 | 0.21 | lasso | 2 | 0.26 | 1.6e-08 | 5.3 | 5.3 | 1.1e-07 | 0.01 | 0.00 | 0.99 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | REM1 | 0.06 | 0.00 | lasso | 3 | 0.01 | 6.7e-02 | -3.6 | -5.3 | 1.1e-07 | -0.09 | 0.56 | 0.02 | TRUE |
32 | GTEx | Cells Transformed fibroblasts | NINL | 0.07 | 0.00 | enet | 5 | 0.01 | 3.4e-02 | 4.1 | -6.0 | 2.5e-09 | 0.00 | 0.05 | 0.55 | TRUE |
33 | GTEx | Cells Transformed fibroblasts | HM13 | 0.07 | 0.05 | lasso | 4 | 0.06 | 3.9e-05 | -8.6 | -9.0 | 2.5e-19 | -0.03 | 0.90 | 0.00 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | FRG1B | 0.05 | 0.04 | lasso | 3 | 0.03 | 2.2e-03 | -5.3 | -5.6 | 2.1e-08 | -0.12 | 0.27 | 0.04 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | RPL36P4 | 0.67 | 0.61 | lasso | 5 | 0.63 | 1.2e-60 | 5.0 | 5.1 | 2.9e-07 | 0.02 | 0.01 | 0.99 | FALSE |
36 | GTEx | Cells Transformed fibroblasts | HM13-AS1 | 0.04 | 0.01 | lasso | 3 | 0.01 | 1.0e-01 | -8.7 | 9.6 | 1.2e-21 | 0.05 | 0.21 | 0.10 | FALSE |
37 | GTEx | Colon Sigmoid | PIGU | 0.13 | 0.09 | enet | 10 | 0.12 | 6.9e-05 | -3.9 | 5.3 | 9.3e-08 | 0.12 | 0.38 | 0.26 | FALSE |
38 | GTEx | Colon Sigmoid | ENTPD6 | 0.17 | 0.12 | enet | 12 | 0.14 | 1.1e-05 | 5.9 | -5.8 | 7.9e-09 | -0.14 | 0.01 | 0.98 | FALSE |
39 | GTEx | Colon Sigmoid | RPL36P4 | 0.59 | 0.57 | lasso | 3 | 0.55 | 3.7e-23 | 5.3 | 5.3 | 9.8e-08 | 0.01 | 0.01 | 0.99 | FALSE |
40 | GTEx | Colon Transverse | DUSP15 | 0.33 | 0.06 | lasso | 6 | 0.14 | 2.2e-07 | -9.1 | 7.6 | 2.5e-14 | 0.07 | 0.41 | 0.03 | TRUE |
41 | GTEx | Colon Transverse | ENTPD6 | 0.10 | 0.09 | lasso | 6 | 0.04 | 6.5e-03 | 5.7 | -5.6 | 1.8e-08 | -0.13 | 0.01 | 0.97 | TRUE |
42 | GTEx | Colon Transverse | RPL36P4 | 0.68 | 0.56 | lasso | 8 | 0.57 | 4.0e-32 | 5.0 | 5.3 | 8.9e-08 | 0.02 | 0.01 | 0.99 | FALSE |
43 | GTEx | Esophagus Gastroesophageal Junction | COX4I2 | 0.37 | -0.01 | lasso | 6 | 0.02 | 5.1e-02 | -1.7 | -7.2 | 4.2e-13 | -0.04 | 0.10 | 0.05 | FALSE |
44 | GTEx | Esophagus Gastroesophageal Junction | FRG1B | 0.09 | 0.04 | enet | 3 | 0.00 | 3.4e-01 | -6.2 | -6.2 | 5.8e-10 | -0.17 | 0.07 | 0.05 | FALSE |
45 | GTEx | Esophagus Gastroesophageal Junction | RPL36P4 | 0.57 | 0.55 | lasso | 5 | 0.53 | 3.2e-22 | 5.0 | 5.4 | 5.5e-08 | 0.02 | 0.01 | 0.99 | FALSE |
46 | GTEx | Esophagus Mucosa | HM13 | 0.06 | 0.01 | lasso | 5 | 0.00 | 2.7e-01 | -14.2 | -14.0 | 1.2e-44 | -0.09 | 0.12 | 0.04 | FALSE |
47 | GTEx | Esophagus Mucosa | E2F1 | 0.07 | 0.04 | enet | 9 | 0.03 | 5.8e-03 | 5.5 | 5.5 | 3.6e-08 | 0.03 | 0.37 | 0.07 | FALSE |
48 | GTEx | Esophagus Mucosa | ENTPD6 | 0.09 | 0.04 | enet | 20 | 0.06 | 4.2e-05 | 4.1 | -5.8 | 8.7e-09 | -0.03 | 0.30 | 0.67 | TRUE |
49 | GTEx | Esophagus Muscularis | ABHD12 | 0.10 | 0.10 | enet | 42 | 0.09 | 4.5e-06 | 4.6 | 5.4 | 6.7e-08 | 0.04 | 0.84 | 0.15 | TRUE |
50 | GTEx | Esophagus Muscularis | COX4I2 | 0.09 | 0.12 | enet | 10 | 0.09 | 4.1e-06 | -11.0 | -11.8 | 6.0e-32 | -0.04 | 0.99 | 0.00 | FALSE |
51 | GTEx | Heart Atrial Appendage | FRG1B | 0.07 | 0.02 | enet | 10 | 0.01 | 1.7e-01 | -6.2 | -6.3 | 3.5e-10 | -0.17 | 0.20 | 0.05 | FALSE |
52 | GTEx | Heart Atrial Appendage | RPL36P4 | 0.53 | 0.50 | enet | 9 | 0.54 | 6.1e-28 | 5.3 | 5.5 | 3.2e-08 | 0.01 | 0.00 | 0.99 | FALSE |
53 | GTEx | Heart Left Ventricle | COX4I2 | 0.06 | 0.05 | lasso | 6 | 0.01 | 6.2e-02 | -14.2 | -14.1 | 5.0e-45 | -0.07 | 0.68 | 0.02 | FALSE |
54 | GTEx | Heart Left Ventricle | RPL36P4 | 0.59 | 0.38 | enet | 14 | 0.44 | 2.1e-25 | 5.4 | 5.3 | 1.2e-07 | 0.01 | 0.01 | 0.99 | FALSE |
55 | GTEx | Liver | RPL36P4 | 0.64 | 0.52 | lasso | 3 | 0.52 | 7.3e-17 | 5.3 | 5.2 | 2.3e-07 | 0.01 | 0.01 | 0.99 | FALSE |
56 | GTEx | Lung | MAPRE1 | 0.11 | 0.01 | lasso | 3 | 0.01 | 3.1e-02 | 4.2 | -5.8 | 5.7e-09 | 0.03 | 0.15 | 0.04 | FALSE |
57 | GTEx | Lung | COX4I2 | 0.05 | 0.01 | enet | 6 | 0.03 | 1.8e-03 | -11.0 | -11.1 | 9.9e-29 | -0.05 | 0.34 | 0.04 | FALSE |
58 | GTEx | Lung | FRG1B | 0.08 | 0.04 | enet | 15 | 0.05 | 7.9e-05 | -4.9 | -7.6 | 2.8e-14 | -0.16 | 0.97 | 0.00 | FALSE |
59 | GTEx | Lung | RPL36P4 | 0.66 | 0.62 | lasso | 5 | 0.61 | 4.5e-59 | 5.0 | 5.1 | 2.8e-07 | 0.01 | 0.02 | 0.98 | FALSE |
60 | GTEx | Muscle Skeletal | HM13 | 0.05 | 0.01 | enet | 15 | 0.05 | 2.1e-05 | -4.6 | 10.7 | 1.3e-26 | 0.07 | 0.44 | 0.04 | FALSE |
61 | GTEx | Muscle Skeletal | COX4I2 | 0.10 | 0.08 | lasso | 4 | 0.09 | 3.5e-09 | -11.0 | -11.6 | 3.7e-31 | -0.06 | 1.00 | 0.00 | FALSE |
62 | GTEx | Muscle Skeletal | FRG1B | 0.06 | 0.09 | enet | 12 | 0.08 | 1.2e-08 | -6.0 | -7.3 | 3.3e-13 | -0.24 | 1.00 | 0.00 | FALSE |
63 | GTEx | Nerve Tibial | COX4I2 | 0.13 | 0.10 | lasso | 9 | 0.07 | 6.6e-06 | -11.0 | -9.5 | 3.1e-21 | -0.02 | 0.95 | 0.00 | FALSE |
64 | GTEx | Nerve Tibial | FRG1B | 0.05 | 0.03 | enet | 10 | 0.04 | 1.4e-03 | -3.6 | -5.8 | 5.7e-09 | -0.11 | 0.16 | 0.04 | FALSE |
65 | GTEx | Nerve Tibial | RPL36P4 | 0.76 | 0.65 | enet | 28 | 0.68 | 4.0e-64 | 5.0 | 5.3 | 1.1e-07 | 0.01 | 0.01 | 0.99 | FALSE |
66 | GTEx | Ovary | RPL36P4 | 0.79 | 0.48 | lasso | 8 | 0.37 | 5.0e-10 | 5.0 | 5.2 | 2.0e-07 | 0.01 | 0.01 | 0.99 | FALSE |
67 | GTEx | Pancreas | RPL36P4 | 0.75 | 0.63 | lasso | 6 | 0.66 | 5.5e-36 | 5.0 | 5.1 | 2.7e-07 | 0.01 | 0.01 | 0.99 | FALSE |
68 | GTEx | Pituitary | RPL36P4 | 0.79 | 0.44 | enet | 12 | 0.43 | 4.3e-12 | 5.3 | 5.5 | 4.8e-08 | 0.02 | 0.01 | 0.99 | FALSE |
69 | GTEx | Prostate | RPL36P4 | 0.61 | 0.50 | lasso | 4 | 0.52 | 4.3e-15 | 5.3 | 5.2 | 1.6e-07 | 0.02 | 0.01 | 0.99 | FALSE |
70 | GTEx | Skin Not Sun Exposed Suprapubic | COX4I2 | 0.08 | 0.05 | lasso | 4 | 0.05 | 1.5e-03 | -11.6 | -9.9 | 2.6e-23 | -0.04 | 0.68 | 0.01 | FALSE |
71 | GTEx | Skin Not Sun Exposed Suprapubic | NCOA6 | 0.13 | 0.03 | enet | 12 | 0.03 | 1.5e-02 | 3.2 | 5.5 | 3.5e-08 | 0.09 | 0.20 | 0.13 | TRUE |
72 | GTEx | Skin Not Sun Exposed Suprapubic | RPL36P4 | 0.57 | 0.47 | lasso | 3 | 0.50 | 2.3e-31 | 5.3 | 5.4 | 7.3e-08 | 0.01 | 0.01 | 0.99 | FALSE |
73 | GTEx | Skin Sun Exposed Lower leg | TPX2 | 0.05 | 0.00 | lasso | 3 | 0.00 | 5.5e-01 | -4.4 | -10.2 | 1.4e-24 | -0.06 | 0.21 | 0.10 | FALSE |
74 | GTEx | Skin Sun Exposed Lower leg | MAPRE1 | 0.31 | 0.21 | enet | 57 | 0.24 | 9.3e-20 | 4.7 | -5.9 | 4.3e-09 | 0.05 | 0.99 | 0.01 | TRUE |
75 | GTEx | Skin Sun Exposed Lower leg | COX4I2 | 0.03 | 0.04 | enet | 6 | 0.04 | 3.6e-04 | -11.0 | -11.7 | 1.2e-31 | -0.05 | 0.66 | 0.04 | FALSE |
76 | GTEx | Skin Sun Exposed Lower leg | RPL36P4 | 0.55 | 0.55 | lasso | 7 | 0.56 | 8.7e-56 | 5.3 | 5.4 | 7.0e-08 | 0.02 | 0.01 | 0.99 | FALSE |
77 | GTEx | Skin Sun Exposed Lower leg | HM13-AS1 | 0.07 | 0.07 | enet | 11 | 0.05 | 5.3e-05 | -12.2 | 9.8 | 7.8e-23 | 0.02 | 0.90 | 0.01 | FALSE |
78 | GTEx | Small Intestine Terminal Ileum | RSL24D1P6 | 0.18 | -0.01 | enet | 17 | 0.00 | 3.2e-01 | -3.1 | -5.6 | 2.4e-08 | -0.08 | 0.11 | 0.08 | FALSE |
79 | GTEx | Small Intestine Terminal Ileum | RPL36P4 | 0.73 | 0.36 | lasso | 9 | 0.39 | 1.3e-09 | 5.3 | 5.4 | 6.3e-08 | 0.01 | 0.01 | 0.99 | FALSE |
80 | GTEx | Spleen | RPL36P4 | 0.55 | 0.57 | enet | 10 | 0.57 | 7.7e-18 | 5.0 | 5.3 | 1.3e-07 | 0.02 | 0.01 | 0.99 | FALSE |
81 | GTEx | Stomach | ENTPD6 | 0.10 | 0.03 | enet | 8 | 0.03 | 2.1e-02 | 5.7 | -5.8 | 6.4e-09 | -0.12 | 0.02 | 0.95 | FALSE |
82 | GTEx | Stomach | RPL36P4 | 0.58 | 0.41 | enet | 21 | 0.44 | 9.8e-23 | 5.4 | 5.2 | 2.1e-07 | 0.01 | 0.01 | 0.99 | FALSE |
83 | GTEx | Testis | CBFA2T2 | 0.10 | 0.07 | enet | 11 | 0.07 | 6.1e-04 | 6.4 | -6.3 | 2.9e-10 | -0.02 | 0.04 | 0.92 | FALSE |
84 | GTEx | Testis | DUSP15 | 0.10 | 0.01 | lasso | 8 | 0.00 | 3.1e-01 | -8.8 | -9.4 | 6.0e-21 | -0.10 | 0.08 | 0.06 | FALSE |
85 | GTEx | Testis | FOXS1 | 0.35 | 0.26 | lasso | 7 | 0.26 | 6.0e-12 | 5.3 | 7.5 | 4.8e-14 | 0.00 | 1.00 | 0.00 | FALSE |
86 | GTEx | Testis | RPL36P4 | 0.54 | 0.49 | lasso | 4 | 0.54 | 9.2e-28 | 5.3 | 5.2 | 1.9e-07 | 0.01 | 0.01 | 0.99 | FALSE |
87 | GTEx | Thyroid | CBFA2T2 | 0.11 | 0.05 | enet | 18 | 0.06 | 2.6e-05 | -4.5 | -5.5 | 3.1e-08 | 0.01 | 0.17 | 0.79 | FALSE |
88 | GTEx | Thyroid | COX4I2 | 0.04 | 0.05 | lasso | 2 | 0.03 | 1.8e-03 | -11.0 | -10.8 | 3.9e-27 | -0.04 | 0.47 | 0.02 | FALSE |
89 | GTEx | Uterus | RPL36P4 | 0.68 | 0.46 | lasso | 5 | 0.40 | 4.4e-09 | 5.3 | 5.4 | 6.1e-08 | 0.01 | 0.01 | 0.99 | FALSE |
90 | GTEx | Vagina | PXMP4 | 0.29 | 0.11 | lasso | 4 | 0.17 | 1.0e-04 | 3.8 | -5.8 | 7.9e-09 | 0.00 | 0.04 | 0.06 | FALSE |
91 | GTEx | Vagina | COX4I2 | 0.17 | 0.12 | lasso | 2 | 0.16 | 1.5e-04 | -11.0 | -12.4 | 3.9e-35 | -0.04 | 0.25 | 0.04 | FALSE |
92 | GTEx | Vagina | RPL36P4 | 0.48 | 0.34 | enet | 11 | 0.36 | 3.7e-09 | 5.0 | 5.6 | 2.5e-08 | 0.02 | 0.01 | 0.99 | FALSE |
93 | GTEx | Whole Blood | HM13 | 0.05 | 0.05 | lasso | 4 | 0.05 | 1.4e-05 | -8.7 | -10.5 | 8.7e-26 | -0.07 | 0.98 | 0.00 | FALSE |
94 | GTEx | Whole Blood | APMAP | 0.33 | 0.06 | lasso | 9 | 0.10 | 2.7e-09 | 4.4 | -5.3 | 1.0e-07 | -0.04 | 0.93 | 0.06 | TRUE |
95 | METSIM | Adipose | FRG1B | 0.05 | 0.06 | enet | 6 | 0.06 | 5.2e-10 | -4.8 | -5.1 | 3.0e-07 | -0.12 | 1.00 | 0.00 | FALSE |
96 | METSIM | Adipose | TPX2 | 0.05 | 0.01 | blup | 323 | 0.04 | 4.2e-06 | -11.2 | -13.8 | 2.8e-43 | -0.15 | 1.00 | 0.00 | FALSE |
97 | NTR | Blood | C20orf160 | 0.01 | 0.00 | bslmm | 305 | 0.00 | 8.0e-03 | -11.0 | 6.0 | 1.5e-09 | -0.06 | 0.06 | 0.06 | FALSE |
98 | NTR | Blood | HM13 | 0.03 | 0.05 | lasso | 6 | 0.05 | 2.2e-15 | -8.7 | -9.2 | 5.0e-20 | -0.06 | 1.00 | 0.00 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | FER1L4 | 0.04 | 0.04 | blup | 309 | 0.03 | 4.9e-05 | 4.3 | -5.3 | 9.2e-08 | 0.01 | 0.17 | 0.80 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | HM13 | 0.08 | 0.14 | lasso | 4 | 0.15 | 3.7e-19 | -8.7 | 10.2 | 1.7e-24 | 0.05 | 1.00 | 0.00 | FALSE |
101 | ROSMAP | Brain Pre-frontal Cortex | RALY | 0.09 | 0.16 | lasso | 7 | 0.15 | 2.7e-18 | -5.8 | -5.6 | 2.6e-08 | 0.01 | 0.20 | 0.80 | FALSE |
102 | ROSMAP | Brain Pre-frontal Cortex | ERGIC3 | 0.08 | 0.08 | lasso | 6 | 0.08 | 2.6e-10 | 5.3 | 5.7 | 1.3e-08 | 0.03 | 0.01 | 0.99 | TRUE |
103 | ROSMAP | Brain Pre-frontal Cortex | COX4I2 | 0.12 | 0.04 | enet | 18 | 0.07 | 7.8e-10 | -13.5 | -16.8 | 4.4e-63 | -0.13 | 0.09 | 0.91 | TRUE |
104 | ROSMAP | Brain Pre-frontal Cortex | FRG1B | 0.06 | 0.09 | lasso | 4 | 0.09 | 4.2e-11 | -4.6 | -6.0 | 2.2e-09 | -0.15 | 1.00 | 0.00 | FALSE |
105 | ROSMAP | Brain Pre-frontal Cortex | FAM182B | 0.68 | 0.21 | enet | 58 | 0.35 | 1.9e-47 | 2.9 | 7.3 | 2.8e-13 | 0.00 | 1.00 | 0.00 | TRUE |
106 | ROSMAP | Brain Pre-frontal Cortex | BAK1P1 | 0.30 | 0.20 | lasso | 6 | 0.22 | 5.7e-28 | 5.7 | -6.5 | 9.7e-11 | 0.02 | 0.46 | 0.54 | FALSE |
107 | ROSMAP | Brain Pre-frontal Cortex | C20orf203 | 0.35 | 0.25 | enet | 14 | 0.27 | 1.8e-34 | 5.6 | 6.7 | 1.7e-11 | -0.02 | 0.52 | 0.48 | FALSE |
108 | ROSMAP | Brain Pre-frontal Cortex | RP4-610C12.4 | 0.13 | 0.17 | lasso | 7 | 0.20 | 2.4e-25 | -7.9 | -7.6 | 2.5e-14 | -0.18 | 1.00 | 0.00 | FALSE |
109 | YFS | Blood | HM13 | 0.08 | 0.10 | lasso | 6 | 0.10 | 3.6e-31 | -8.2 | -9.3 | 2.1e-20 | -0.05 | 1.00 | 0.00 | FALSE |
110 | YFS | Blood | PDRG1 | 0.02 | 0.01 | blup | 301 | 0.00 | 9.5e-03 | -1.4 | -6.8 | 9.8e-12 | -0.10 | 0.23 | 0.02 | FALSE |
111 | YFS | Blood | PLAGL2 | 0.02 | 0.00 | bslmm | 312 | 0.01 | 3.1e-03 | 5.7 | 11.8 | 2.5e-32 | 0.07 | 0.04 | 0.08 | FALSE |
112 | YFS | Blood | PYGB | 0.36 | 0.49 | enet | 50 | 0.56 | 7.4e-226 | 4.3 | 5.2 | 2.0e-07 | -0.01 | 0.96 | 0.04 | FALSE |
113 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | COX4I2 | 0.06 | 0.02 | blup | 25 | 0.04 | 2.6e-04 | -13.5 | -13.1 | 3.0e-39 | -0.10 | 0.00 | 0.98 | TRUE |
114 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | HM13 | 0.22 | 0.01 | enet | 15 | 0.08 | 1.9e-07 | -8.6 | -10.8 | 4.8e-27 | -0.11 | 0.10 | 0.65 | FALSE |
115 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PDRG1 | 0.09 | 0.02 | lasso | 2 | 0.06 | 1.2e-05 | -4.8 | -5.8 | 7.2e-09 | -0.15 | 0.02 | 0.14 | FALSE |
116 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | TPX2 | 0.05 | 0.00 | blup | 49 | 0.01 | 5.1e-02 | -14.4 | -14.6 | 2.4e-48 | -0.11 | 0.01 | 0.86 | FALSE |
117 | The Cancer Genome Atlas | Breast Invasive Carcinoma | COX4I2 | 0.08 | 0.06 | enet | 7 | 0.06 | 3.3e-13 | -13.5 | -13.2 | 7.8e-40 | -0.07 | 0.33 | 0.67 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ERGIC3 | 0.01 | 0.00 | blup | 39 | 0.01 | 2.3e-02 | 5.3 | -5.2 | 1.6e-07 | -0.03 | 0.01 | 0.67 | FALSE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ID1 | 0.04 | 0.00 | enet | 9 | 0.02 | 3.6e-04 | -6.2 | -10.4 | 4.1e-25 | -0.08 | 0.01 | 0.89 | FALSE |
120 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MYLK2 | 0.18 | 0.28 | lasso | 4 | 0.28 | 3.1e-58 | -6.3 | -6.3 | 2.3e-10 | -0.07 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PSIMCT-1 | 0.51 | 0.09 | enet | 6 | 0.11 | 3.9e-06 | -3.8 | -9.8 | 1.7e-22 | -0.12 | 0.05 | 0.28 | FALSE |
122 | The Cancer Genome Atlas | Colon Adenocarcinoma | CBFA2T2 | 0.13 | 0.04 | lasso | 1 | 0.03 | 1.1e-02 | 6.1 | -6.0 | 1.4e-09 | 0.00 | 0.01 | 0.72 | FALSE |
123 | The Cancer Genome Atlas | Esophageal Carcinoma | COX4I2 | 0.17 | 0.07 | blup | 25 | 0.10 | 4.5e-04 | -6.3 | -8.8 | 9.5e-19 | -0.08 | 0.05 | 0.44 | FALSE |
124 | The Cancer Genome Atlas | Glioblastoma Multiforme | FAM182A | 0.45 | 0.28 | lasso | 3 | 0.35 | 1.7e-11 | -4.6 | -5.9 | 3.6e-09 | -0.20 | 0.02 | 0.97 | TRUE |
125 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | HM13 | 0.06 | 0.03 | blup | 48 | 0.07 | 3.0e-08 | -8.7 | -10.1 | 3.8e-24 | -0.08 | 0.04 | 0.96 | FALSE |
126 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | COX4I2 | 0.06 | 0.03 | lasso | 3 | 0.03 | 1.5e-04 | -13.5 | -13.3 | 1.6e-40 | -0.07 | 0.01 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ERGIC3 | 0.09 | 0.10 | lasso | 2 | 0.09 | 3.4e-10 | 5.0 | -5.4 | 8.1e-08 | -0.03 | 0.02 | 0.97 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TTLL9 | 0.03 | 0.03 | blup | 61 | 0.02 | 1.3e-03 | -5.7 | 5.8 | 7.9e-09 | 0.05 | 0.23 | 0.05 | FALSE |
129 | The Cancer Genome Atlas | Brain Lower Grade Glioma | BCL2L1 | 0.05 | 0.03 | enet | 8 | 0.02 | 9.4e-04 | -14.5 | -11.6 | 7.0e-31 | -0.11 | 0.00 | 0.96 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C20orf203 | 0.06 | 0.06 | blup | 48 | 0.05 | 1.6e-06 | -5.7 | 6.8 | 1.2e-11 | -0.01 | 0.01 | 0.99 | TRUE |
131 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CBFA2T2 | 0.02 | 0.01 | blup | 31 | 0.01 | 1.8e-02 | 6.1 | -5.7 | 1.6e-08 | 0.02 | 0.01 | 0.71 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DUSP15 | 0.05 | 0.02 | enet | 8 | 0.04 | 3.1e-05 | -14.2 | -12.1 | 7.6e-34 | -0.07 | 0.01 | 0.98 | FALSE |
133 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FAM182A | 0.54 | 0.30 | enet | 6 | 0.44 | 9.2e-55 | 4.8 | -5.3 | 1.2e-07 | -0.20 | 0.64 | 0.35 | FALSE |
134 | The Cancer Genome Atlas | Brain Lower Grade Glioma | HM13 | 0.16 | 0.05 | blup | 48 | 0.05 | 1.1e-06 | -3.8 | -6.5 | 9.1e-11 | -0.13 | 0.80 | 0.02 | TRUE |
135 | The Cancer Genome Atlas | Lung Adenocarcinoma | COX4I2 | 0.04 | 0.06 | enet | 6 | 0.05 | 9.8e-07 | -9.1 | -9.4 | 3.3e-21 | -0.05 | 0.71 | 0.26 | FALSE |
136 | The Cancer Genome Atlas | Lung Adenocarcinoma | ERGIC3 | 0.04 | 0.03 | blup | 39 | 0.03 | 9.3e-05 | 5.3 | -5.3 | 1.1e-07 | -0.03 | 0.01 | 0.97 | FALSE |
137 | The Cancer Genome Atlas | Lung Adenocarcinoma | MYLK2 | 0.07 | 0.08 | lasso | 1 | 0.08 | 2.5e-09 | -6.3 | -6.3 | 2.3e-10 | -0.07 | 1.00 | 0.00 | FALSE |
138 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | COX4I2 | 0.04 | 0.03 | blup | 25 | 0.04 | 2.5e-05 | -14.2 | -13.8 | 4.5e-43 | -0.08 | 0.01 | 0.98 | FALSE |
139 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | HM13 | 0.05 | 0.01 | blup | 48 | 0.02 | 8.1e-04 | -9.1 | -11.1 | 1.5e-28 | -0.11 | 0.01 | 0.98 | FALSE |
140 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MYLK2 | 0.04 | 0.04 | lasso | 2 | 0.04 | 5.0e-05 | -6.3 | -6.2 | 5.2e-10 | -0.08 | 0.44 | 0.10 | FALSE |
141 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ITCH | 0.14 | 0.04 | lasso | 4 | 0.03 | 3.8e-03 | -5.4 | -5.6 | 1.9e-08 | 0.01 | 0.00 | 0.71 | FALSE |
142 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | MYLK2 | 0.16 | 0.10 | lasso | 6 | 0.10 | 9.4e-05 | -6.3 | -6.3 | 2.3e-10 | -0.07 | 0.47 | 0.04 | FALSE |
143 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C20orf203 | 0.04 | 0.03 | blup | 48 | 0.02 | 3.7e-03 | 5.8 | 6.5 | 7.5e-11 | 0.03 | 0.00 | 0.89 | FALSE |
144 | The Cancer Genome Atlas | Prostate Adenocarcinoma | COX4I2 | 0.07 | 0.07 | lasso | 5 | 0.07 | 2.0e-07 | -11.0 | -12.0 | 2.2e-33 | -0.06 | 0.21 | 0.78 | FALSE |
145 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MYLK2 | 0.05 | 0.04 | enet | 6 | 0.04 | 3.6e-05 | -6.4 | -5.8 | 7.6e-09 | -0.09 | 0.25 | 0.04 | FALSE |
146 | The Cancer Genome Atlas | Rectum Adenocarcinoma | DUSP15 | 0.17 | 0.11 | blup | 44 | 0.13 | 6.6e-04 | -8.7 | 11.8 | 2.9e-32 | 0.13 | 0.02 | 0.42 | TRUE |
147 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FAM182A | 0.25 | 0.18 | lasso | 4 | 0.16 | 6.7e-10 | 4.8 | -5.2 | 1.8e-07 | -0.24 | 0.17 | 0.83 | FALSE |
148 | The Cancer Genome Atlas | Stomach Adenocarcinoma | COX4I2 | 0.09 | 0.03 | blup | 25 | 0.03 | 3.8e-03 | -11.0 | -8.9 | 7.4e-19 | -0.01 | 0.01 | 0.45 | FALSE |
149 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ERGIC3 | 0.07 | 0.04 | enet | 4 | 0.03 | 2.6e-03 | 5.4 | -5.3 | 1.2e-07 | -0.02 | 0.01 | 0.88 | FALSE |
150 | The Cancer Genome Atlas | Stomach Adenocarcinoma | MYLK2 | 0.09 | 0.05 | lasso | 4 | 0.05 | 7.8e-05 | -6.3 | -6.2 | 5.0e-10 | -0.07 | 0.84 | 0.01 | FALSE |
151 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | COX4I2 | 0.10 | 0.03 | blup | 25 | 0.05 | 1.0e-02 | -13.5 | -12.3 | 1.4e-34 | -0.10 | 0.01 | 0.63 | FALSE |
152 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | NINL | 0.11 | 0.03 | blup | 81 | 0.07 | 2.1e-03 | -4.6 | -5.7 | 1.3e-08 | 0.00 | 0.04 | 0.60 | FALSE |
153 | The Cancer Genome Atlas | Thyroid Carcinoma | C20orf203 | 0.14 | 0.04 | enet | 18 | 0.06 | 1.1e-06 | 5.7 | 5.9 | 3.0e-09 | -0.05 | 0.00 | 0.99 | FALSE |
154 | The Cancer Genome Atlas | Thyroid Carcinoma | COX4I2 | 0.02 | 0.03 | lasso | 2 | 0.03 | 1.0e-03 | -11.0 | -11.0 | 4.7e-28 | -0.04 | 0.02 | 0.66 | FALSE |
155 | The Cancer Genome Atlas | Thyroid Carcinoma | RALY | 0.05 | 0.04 | blup | 53 | 0.05 | 1.6e-05 | -5.6 | 6.0 | 2.6e-09 | 0.02 | 0.02 | 0.98 | TRUE |