TWAS
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Traits
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Blood Platelet Count
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chr3:141,845,000-143,307,072
Best TWAS P=2.56e-09 · Best GWAS P=8.35e-09 conditioned to 0.0141
141.8M
142M
142.2M
142.4M
142.6M
142.8M
143M
143.2M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
PCOLCE2
0.13
0.14
lasso
4
0.14
2.3e-15
-5.7
-6.0
2.6e-09
-0.66
0
1
TRUE
2
GTEx
Artery Aorta
PCOLCE2
0.16
0.15
lasso
2
0.14
2.3e-08
-5.6
-5.7
9.9e-09
-0.66
0
1
FALSE
1
CommonMind
Brain Pre-frontal Cortex
PCOLCE2
0.16
0.12
lasso
4
0.12
5.5e-14
-5.6
-5.3
9.0e-08
-0.64
0
1
FALSE