Best TWAS P=3.86e-08 · Best GWAS P=1.11e-07 conditioned to 0.158
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | METSIM | Adipose | SLC2A9 | 0.05 | 0.04 | lasso | 4 | 0.03 | 9.3e-06 | -5.1 | -5.2 | 1.7e-07 | 0.97 | 0.02 | 0.98 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC2A9 | 0.10 | 0.05 | blup | 208 | 0.05 | 2.7e-05 | -5.1 | -5.5 | 3.9e-08 | 0.82 | 0.01 | 0.97 | TRUE |