TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Blood Platelet Count
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chr6:24,010,084-25,414,846
Best TWAS P=1.75e-07 · Best GWAS P=8.89e-08 conditioned to 3.87e-07
24M
24.2M
24.4M
24.6M
24.8M
25M
25.2M
25.4M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Heart Atrial Appendage
C6orf62
0.18
0.17
lasso
3
0.12
7.0e-06
5.34
5.2
1.7e-07
-0.05
0.01
0.99
TRUE
2
The Cancer Genome Atlas
Prostate Adenocarcinoma
KIAA0319
0.08
0.01
blup
140
0.01
2.5e-02
0.67
5.2
2.0e-07
0.00
0.04
0.46
TRUE