Best TWAS P=1.17e-40 · Best GWAS P=6.2e-39 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | C6orf106 | 0.29 | 0.21 | bslmm | 382 | 0.23 | 6.9e-28 | -12.06 | -8.3 | 1.2e-16 | 0.79 | 0.29 | 0.71 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | PACSIN1 | 0.07 | 0.01 | lasso | 6 | 0.02 | 1.1e-03 | -12.65 | -12.7 | 7.2e-37 | 0.76 | 0.05 | 0.86 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | SNRPC | 0.10 | 0.16 | lasso | 4 | 0.15 | 3.6e-18 | -11.02 | 11.8 | 5.4e-32 | -0.68 | 1.00 | 0.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | UHRF1BP1 | 0.17 | 0.23 | lasso | 19 | 0.22 | 5.8e-27 | -11.01 | -10.9 | 8.8e-28 | 0.61 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | UHRF1BP1 | 0.30 | 0.35 | enet | 28 | 0.36 | 1.6e-30 | -11.03 | -11.1 | 1.2e-28 | 0.61 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | RNF8 | 0.19 | 0.12 | lasso | 4 | 0.12 | 2.3e-10 | -6.02 | 6.8 | 1.0e-11 | 0.04 | 1.00 | 0.00 | TRUE |
7 | GTEx | Adipose Subcutaneous | SNRPC | 0.13 | 0.13 | enet | 21 | 0.13 | 1.2e-10 | -11.03 | 7.5 | 8.5e-14 | -0.42 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Visceral Omentum | UHRF1BP1 | 0.30 | 0.34 | lasso | 3 | 0.34 | 3.0e-18 | -11.01 | -11.0 | 2.4e-28 | 0.62 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adrenal Gland | UHRF1BP1 | 0.32 | 0.26 | enet | 33 | 0.33 | 1.3e-12 | -11.03 | -7.3 | 2.8e-13 | 0.37 | 1.00 | 0.00 | FALSE |
10 | GTEx | Adrenal Gland | SNRPC | 0.13 | 0.04 | lasso | 6 | 0.03 | 2.7e-02 | -12.05 | 11.0 | 2.4e-28 | -0.58 | 0.16 | 0.42 | TRUE |
11 | GTEx | Artery Aorta | UHRF1BP1 | 0.35 | 0.32 | lasso | 10 | 0.30 | 7.7e-17 | -11.01 | -11.2 | 3.2e-29 | 0.62 | 1.00 | 0.00 | FALSE |
12 | GTEx | Artery Aorta | SNRPC | 0.06 | 0.03 | enet | 14 | 0.02 | 1.8e-02 | -11.31 | 6.2 | 5.3e-10 | -0.32 | 0.22 | 0.10 | FALSE |
13 | GTEx | Artery Coronary | ANKS1A | 0.23 | 0.09 | lasso | 17 | 0.09 | 5.8e-04 | -3.90 | 8.2 | 1.9e-16 | -0.18 | 0.06 | 0.07 | TRUE |
14 | GTEx | Artery Coronary | UHRF1BP1 | 0.33 | 0.36 | lasso | 2 | 0.35 | 1.6e-12 | -11.03 | -11.0 | 2.7e-28 | 0.62 | 1.00 | 0.00 | FALSE |
15 | GTEx | Artery Tibial | UHRF1BP1 | 0.31 | 0.43 | lasso | 11 | 0.43 | 4.0e-36 | -11.03 | -10.4 | 3.4e-25 | 0.55 | 1.00 | 0.00 | FALSE |
16 | GTEx | Artery Tibial | SNRPC | 0.06 | 0.06 | lasso | 4 | 0.05 | 1.3e-04 | -11.09 | 11.4 | 3.8e-30 | -0.65 | 0.94 | 0.03 | FALSE |
17 | GTEx | Brain Caudate basal ganglia | UHRF1BP1 | 0.19 | 0.14 | lasso | 7 | 0.12 | 3.1e-04 | -11.06 | -10.0 | 1.9e-23 | 0.49 | 0.41 | 0.04 | FALSE |
18 | GTEx | Brain Caudate basal ganglia | SNRPC | 0.19 | 0.15 | lasso | 3 | 0.06 | 7.7e-03 | -11.04 | 11.7 | 8.0e-32 | -0.67 | 0.38 | 0.17 | FALSE |
19 | GTEx | Brain Cerebellar Hemisphere | UHRF1BP1 | 0.22 | 0.16 | lasso | 12 | 0.15 | 1.0e-04 | -11.04 | -11.2 | 2.6e-29 | 0.67 | 0.26 | 0.42 | FALSE |
20 | GTEx | Brain Cerebellum | UHRF1BP1 | 0.14 | 0.09 | enet | 23 | 0.12 | 1.5e-04 | -11.03 | -7.2 | 8.5e-13 | 0.53 | 0.16 | 0.32 | FALSE |
21 | GTEx | Brain Cerebellum | RNF8 | 0.26 | 0.24 | lasso | 2 | 0.21 | 5.9e-07 | -6.02 | 5.9 | 3.9e-09 | 0.04 | 0.33 | 0.12 | FALSE |
22 | GTEx | Brain Cortex | C6orf106 | 0.22 | 0.07 | enet | 16 | 0.10 | 1.1e-03 | -12.67 | -10.6 | 2.7e-26 | 0.69 | 0.04 | 0.93 | FALSE |
23 | GTEx | Brain Frontal Cortex BA9 | UHRF1BP1 | 0.18 | 0.00 | lasso | 10 | 0.02 | 7.3e-02 | -11.38 | -10.4 | 1.8e-25 | 0.43 | 0.12 | 0.08 | FALSE |
24 | GTEx | Brain Frontal Cortex BA9 | RPS10 | 0.21 | 0.08 | lasso | 3 | 0.06 | 8.6e-03 | -3.56 | -6.0 | 2.7e-09 | 0.28 | 0.06 | 0.51 | FALSE |
25 | GTEx | Brain Putamen basal ganglia | UHRF1BP1 | 0.20 | 0.17 | lasso | 2 | 0.16 | 1.5e-04 | -10.95 | -11.0 | 2.3e-28 | 0.62 | 0.25 | 0.08 | FALSE |
26 | GTEx | Breast Mammary Tissue | UHRF1BP1 | 0.34 | 0.28 | enet | 46 | 0.29 | 4.7e-15 | -11.01 | -11.3 | 7.8e-30 | 0.56 | 1.00 | 0.00 | FALSE |
27 | GTEx | Breast Mammary Tissue (Male) | UHRF1BP1 | 0.19 | 0.16 | enet | 24 | 0.08 | 5.6e-03 | -10.95 | -11.1 | 1.3e-28 | 0.62 | 0.41 | 0.12 | FALSE |
28 | GTEx | Breast Mammary Tissue (Female) | UHRF1BP1 | 0.23 | 0.21 | lasso | 3 | 0.20 | 1.0e-06 | -11.06 | -10.6 | 4.6e-26 | 0.53 | 0.81 | 0.06 | FALSE |
29 | GTEx | Cells EBV-transformed lymphocytes | UHRF1BP1 | 0.37 | 0.08 | enet | 46 | 0.11 | 1.7e-04 | -11.04 | -8.3 | 1.2e-16 | 0.54 | 0.27 | 0.43 | FALSE |
30 | GTEx | Cells EBV-transformed lymphocytes | C6orf106 | 0.20 | 0.00 | lasso | 5 | 0.00 | 2.7e-01 | -13.05 | -13.0 | 8.4e-39 | 0.90 | 0.01 | 0.89 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | UHRF1BP1 | 0.34 | 0.32 | enet | 44 | 0.31 | 2.4e-23 | -11.06 | -12.4 | 2.8e-35 | 0.66 | 1.00 | 0.00 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | SRSF3 | 0.09 | 0.04 | lasso | 2 | 0.01 | 4.2e-02 | 4.52 | 5.1 | 3.0e-07 | -0.01 | 0.75 | 0.05 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | RNF8 | 0.11 | 0.07 | lasso | 3 | 0.08 | 7.6e-07 | -6.02 | 5.4 | 7.2e-08 | 0.06 | 0.87 | 0.01 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | RPS10 | 0.12 | 0.05 | lasso | 4 | 0.06 | 4.5e-05 | -9.94 | -7.7 | 1.1e-14 | 0.13 | 0.98 | 0.00 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | NUDT3 | 0.11 | 0.03 | lasso | 3 | 0.02 | 9.2e-03 | -8.06 | 7.2 | 7.9e-13 | -0.12 | 0.24 | 0.03 | FALSE |
36 | GTEx | Colon Sigmoid | UHRF1BP1 | 0.44 | 0.36 | lasso | 12 | 0.38 | 1.8e-14 | -11.03 | -9.6 | 1.2e-21 | 0.47 | 1.00 | 0.00 | FALSE |
37 | GTEx | Colon Transverse | UHRF1BP1 | 0.42 | 0.28 | lasso | 4 | 0.28 | 1.6e-13 | -11.01 | -11.2 | 3.2e-29 | 0.67 | 1.00 | 0.00 | FALSE |
38 | GTEx | Colon Transverse | C6orf106 | 0.15 | 0.05 | lasso | 1 | 0.03 | 1.5e-02 | -8.57 | -8.6 | 1.1e-17 | 0.57 | 0.06 | 0.64 | TRUE |
39 | GTEx | Esophagus Gastroesophageal Junction | UHRF1BP1 | 0.47 | 0.38 | enet | 22 | 0.43 | 7.3e-17 | -11.38 | -9.8 | 1.3e-22 | 0.54 | 1.00 | 0.00 | FALSE |
40 | GTEx | Esophagus Mucosa | UHRF1BP1 | 0.14 | 0.15 | enet | 28 | 0.17 | 1.3e-11 | -11.04 | -11.6 | 4.3e-31 | 0.66 | 1.00 | 0.00 | FALSE |
41 | GTEx | Esophagus Mucosa | SNRPC | 0.12 | 0.10 | lasso | 2 | 0.08 | 4.8e-06 | -11.01 | 11.0 | 2.3e-28 | -0.61 | 0.99 | 0.00 | FALSE |
42 | GTEx | Esophagus Muscularis | UHRF1BP1 | 0.42 | 0.35 | enet | 48 | 0.33 | 1.0e-20 | -11.04 | -10.5 | 9.9e-26 | 0.47 | 1.00 | 0.00 | FALSE |
43 | GTEx | Esophagus Muscularis | STK38 | 0.17 | 0.00 | lasso | 3 | 0.04 | 2.9e-03 | 4.38 | -5.3 | 1.4e-07 | 0.07 | 0.12 | 0.04 | FALSE |
44 | GTEx | Esophagus Muscularis | SNRPC | 0.09 | 0.11 | lasso | 3 | 0.07 | 3.8e-05 | -11.03 | 11.1 | 1.5e-28 | -0.63 | 0.95 | 0.03 | FALSE |
45 | GTEx | Esophagus Muscularis | NUDT3 | 0.12 | 0.00 | lasso | 7 | 0.02 | 3.2e-02 | -9.88 | 8.3 | 1.1e-16 | -0.19 | 0.13 | 0.10 | FALSE |
46 | GTEx | Heart Atrial Appendage | UHRF1BP1 | 0.13 | 0.07 | enet | 17 | 0.05 | 1.9e-03 | -11.09 | -8.7 | 3.7e-18 | 0.41 | 0.36 | 0.38 | FALSE |
47 | GTEx | Heart Left Ventricle | UHRF1BP1 | 0.23 | 0.12 | lasso | 7 | 0.22 | 1.2e-11 | -11.01 | -7.5 | 6.8e-14 | 0.36 | 1.00 | 0.00 | FALSE |
48 | GTEx | Liver | UHRF1BP1 | 0.13 | 0.04 | lasso | 3 | 0.05 | 1.8e-02 | -11.03 | -9.6 | 1.1e-21 | 0.54 | 0.16 | 0.10 | FALSE |
49 | GTEx | Lung | ETV7 | 0.09 | 0.01 | lasso | 5 | 0.06 | 4.4e-05 | 5.15 | -5.4 | 5.7e-08 | 0.03 | 0.43 | 0.03 | FALSE |
50 | GTEx | Lung | UHRF1BP1 | 0.17 | 0.20 | enet | 22 | 0.18 | 4.3e-14 | -11.10 | -11.3 | 2.0e-29 | 0.59 | 1.00 | 0.00 | FALSE |
51 | GTEx | Muscle Skeletal | UHRF1BP1 | 0.34 | 0.34 | enet | 45 | 0.39 | 4.3e-40 | -11.03 | -8.5 | 1.8e-17 | 0.36 | 1.00 | 0.00 | FALSE |
52 | GTEx | Muscle Skeletal | SNRPC | 0.03 | 0.02 | lasso | 3 | 0.02 | 8.3e-03 | -11.09 | 12.0 | 2.0e-33 | -0.71 | 0.30 | 0.23 | FALSE |
53 | GTEx | Muscle Skeletal | C6orf106 | 0.08 | 0.06 | lasso | 4 | 0.06 | 7.1e-07 | -12.14 | 13.4 | 1.2e-40 | -0.93 | 0.00 | 1.00 | TRUE |
54 | GTEx | Nerve Tibial | UHRF1BP1 | 0.31 | 0.31 | lasso | 6 | 0.31 | 3.9e-22 | -11.03 | -11.3 | 1.4e-29 | 0.61 | 1.00 | 0.00 | FALSE |
55 | GTEx | Nerve Tibial | RNF8 | 0.18 | 0.05 | lasso | 5 | 0.04 | 1.2e-03 | -6.28 | 6.1 | 1.3e-09 | 0.03 | 0.62 | 0.07 | FALSE |
56 | GTEx | Nerve Tibial | SNRPC | 0.12 | 0.10 | lasso | 4 | 0.08 | 1.5e-06 | -11.03 | 11.1 | 1.4e-28 | -0.63 | 0.99 | 0.01 | FALSE |
57 | GTEx | Nerve Tibial | C6orf106 | 0.11 | 0.07 | enet | 17 | 0.07 | 1.3e-05 | -12.56 | -9.7 | 2.2e-22 | 0.83 | 0.12 | 0.83 | FALSE |
58 | GTEx | Pancreas | C6orf106 | 0.14 | 0.11 | enet | 11 | 0.13 | 2.8e-06 | -12.05 | -11.6 | 2.7e-31 | 0.85 | 0.14 | 0.84 | FALSE |
59 | GTEx | Prostate | ETV7 | 0.36 | 0.12 | enet | 36 | 0.07 | 7.3e-03 | 5.41 | -6.4 | 1.2e-10 | 0.00 | 0.17 | 0.11 | TRUE |
60 | GTEx | Skin Not Sun Exposed Suprapubic | TEAD3 | 0.15 | 0.06 | lasso | 5 | 0.08 | 2.5e-05 | 5.54 | 5.8 | 8.7e-09 | -0.19 | 0.78 | 0.01 | FALSE |
61 | GTEx | Skin Not Sun Exposed Suprapubic | UHRF1BP1 | 0.20 | 0.10 | enet | 30 | 0.15 | 2.1e-08 | -10.95 | -8.1 | 5.1e-16 | 0.22 | 0.99 | 0.00 | FALSE |
62 | GTEx | Skin Not Sun Exposed Suprapubic | SNRPC | 0.18 | 0.04 | enet | 37 | 0.03 | 1.0e-02 | -11.03 | 7.4 | 1.2e-13 | -0.26 | 0.18 | 0.30 | FALSE |
63 | GTEx | Skin Sun Exposed Lower leg | UHRF1BP1 | 0.19 | 0.13 | enet | 33 | 0.14 | 2.7e-11 | -11.03 | -8.8 | 1.6e-18 | 0.54 | 1.00 | 0.00 | FALSE |
64 | GTEx | Skin Sun Exposed Lower leg | SNRPC | 0.03 | 0.04 | lasso | 2 | 0.03 | 1.9e-03 | -11.03 | 11.1 | 2.0e-28 | -0.62 | 0.48 | 0.18 | FALSE |
65 | GTEx | Small Intestine Terminal Ileum | UHRF1BP1 | 0.20 | 0.03 | lasso | 5 | 0.00 | 3.4e-01 | -11.10 | -11.9 | 1.4e-32 | 0.62 | 0.13 | 0.14 | FALSE |
66 | GTEx | Spleen | UHRF1BP1 | 0.34 | 0.21 | enet | 36 | 0.17 | 4.5e-05 | -11.01 | -12.4 | 3.4e-35 | 0.56 | 0.58 | 0.10 | FALSE |
67 | GTEx | Stomach | UHRF1BP1 | 0.24 | 0.22 | enet | 20 | 0.23 | 2.2e-11 | -11.14 | -12.2 | 3.7e-34 | 0.61 | 1.00 | 0.00 | FALSE |
68 | GTEx | Thyroid | UHRF1BP1 | 0.13 | 0.06 | enet | 37 | 0.08 | 5.9e-07 | -4.07 | -6.5 | 1.1e-10 | 0.24 | 0.99 | 0.00 | FALSE |
69 | GTEx | Thyroid | SNRPC | 0.07 | 0.04 | lasso | 6 | 0.05 | 1.6e-04 | -11.03 | 11.0 | 4.8e-28 | -0.60 | 0.79 | 0.06 | FALSE |
70 | GTEx | Thyroid | C6orf106 | 0.09 | 0.01 | enet | 29 | 0.01 | 1.1e-01 | -12.60 | -8.1 | 7.4e-16 | 0.72 | 0.06 | 0.39 | FALSE |
71 | GTEx | Uterus | UHRF1BP1 | 0.20 | 0.03 | lasso | 4 | 0.07 | 1.8e-02 | -11.03 | -12.5 | 4.6e-36 | 0.74 | 0.09 | 0.19 | FALSE |
72 | GTEx | Vagina | UHRF1BP1 | 0.31 | 0.05 | lasso | 8 | 0.04 | 5.0e-02 | -11.03 | -10.7 | 7.7e-27 | 0.59 | 0.14 | 0.22 | FALSE |
73 | GTEx | Whole Blood | UHRF1BP1 | 0.14 | 0.14 | lasso | 7 | 0.14 | 2.9e-13 | -11.04 | -11.5 | 9.5e-31 | 0.57 | 1.00 | 0.00 | FALSE |
74 | METSIM | Adipose | SNRPC | 0.05 | 0.05 | lasso | 7 | 0.07 | 2.9e-11 | -11.01 | 8.9 | 4.5e-19 | -0.37 | 1.00 | 0.00 | FALSE |
75 | METSIM | Adipose | UHRF1BP1 | 0.16 | 0.31 | enet | 30 | 0.32 | 1.0e-49 | -11.09 | -10.4 | 3.5e-25 | 0.54 | 1.00 | 0.00 | FALSE |
76 | NTR | Blood | C6orf106 | 0.03 | 0.02 | lasso | 6 | 0.02 | 7.2e-07 | -12.68 | -11.5 | 1.5e-30 | 0.89 | 0.23 | 0.77 | FALSE |
77 | NTR | Blood | ETV7 | 0.04 | 0.05 | lasso | 2 | 0.05 | 1.8e-15 | 5.15 | -5.3 | 1.1e-07 | -0.03 | 1.00 | 0.00 | FALSE |
78 | NTR | Blood | KCTD20 | 0.02 | 0.01 | enet | 13 | 0.01 | 1.8e-04 | 6.86 | 5.6 | 2.5e-08 | -0.01 | 0.99 | 0.00 | FALSE |
79 | NTR | Blood | UHRF1BP1 | 0.03 | 0.05 | enet | 19 | 0.05 | 7.4e-15 | -10.91 | -11.0 | 6.1e-28 | 0.66 | 1.00 | 0.00 | FALSE |
80 | ROSMAP | Brain Pre-frontal Cortex | TEAD3 | 0.07 | 0.03 | bslmm | 421 | 0.04 | 5.6e-06 | -7.68 | 10.5 | 9.4e-26 | -0.40 | 0.69 | 0.14 | FALSE |
81 | ROSMAP | Brain Pre-frontal Cortex | UHRF1BP1 | 0.16 | 0.27 | lasso | 10 | 0.28 | 2.7e-36 | -10.91 | -10.8 | 5.0e-27 | 0.58 | 1.00 | 0.00 | FALSE |
82 | ROSMAP | Brain Pre-frontal Cortex | RNF8 | 0.14 | 0.10 | lasso | 4 | 0.09 | 1.8e-11 | -6.02 | 5.6 | 1.7e-08 | 0.03 | 1.00 | 0.00 | FALSE |
83 | ROSMAP | Brain Pre-frontal Cortex | PACSIN1 | 0.09 | 0.00 | blup | 359 | 0.02 | 4.5e-04 | -12.06 | -12.3 | 9.6e-35 | 0.66 | 0.05 | 0.76 | FALSE |
84 | ROSMAP | Brain Pre-frontal Cortex | SNRPC | 0.15 | 0.27 | lasso | 4 | 0.27 | 4.0e-35 | -11.09 | 11.1 | 1.0e-28 | -0.62 | 1.00 | 0.00 | FALSE |
85 | ROSMAP | Brain Pre-frontal Cortex | RPS10 | 0.11 | 0.01 | blup | 356 | 0.04 | 5.0e-06 | -10.38 | -8.3 | 1.3e-16 | 0.40 | 0.50 | 0.19 | TRUE |
86 | ROSMAP | Brain Pre-frontal Cortex | C6orf106 | 0.30 | 0.26 | bslmm | 372 | 0.33 | 9.3e-44 | -12.68 | -8.8 | 1.8e-18 | 0.77 | 0.20 | 0.80 | TRUE |
87 | ROSMAP | Brain Pre-frontal Cortex | RPL10A | 0.30 | 0.18 | bslmm | 409 | 0.19 | 2.6e-24 | -0.49 | -5.9 | 4.7e-09 | 0.21 | 1.00 | 0.00 | FALSE |
88 | YFS | Blood | RPS10 | 0.05 | 0.05 | bslmm | 353 | 0.05 | 2.2e-16 | -10.38 | -9.5 | 1.9e-21 | 0.14 | 1.00 | 0.00 | FALSE |
89 | YFS | Blood | SNRPC | 0.02 | 0.03 | lasso | 5 | 0.02 | 3.0e-08 | -11.38 | 11.1 | 8.5e-29 | -0.67 | 0.98 | 0.02 | FALSE |
90 | YFS | Blood | UHRF1BP1 | 0.18 | 0.34 | enet | 36 | 0.34 | 2.5e-117 | -11.16 | -11.7 | 8.5e-32 | 0.67 | 1.00 | 0.00 | FALSE |
91 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PXT1 | 0.03 | 0.04 | lasso | 1 | 0.03 | 2.3e-03 | 5.12 | 5.1 | 3.1e-07 | 0.05 | 0.05 | 0.61 | FALSE |
92 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | UHRF1BP1 | 0.03 | 0.04 | lasso | 3 | 0.04 | 1.7e-04 | -11.06 | -11.1 | 2.1e-28 | 0.62 | 0.31 | 0.06 | FALSE |
93 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RNF8 | 0.02 | 0.03 | lasso | 1 | 0.02 | 1.4e-05 | -6.02 | 6.0 | 1.8e-09 | 0.03 | 0.45 | 0.01 | FALSE |
94 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RPS10 | 0.01 | 0.01 | enet | 1 | 0.01 | 1.2e-02 | -10.38 | -10.4 | 3.1e-25 | 0.15 | 0.00 | 0.99 | TRUE |
95 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SNRPC | 0.01 | 0.01 | blup | 31 | 0.00 | 3.0e-02 | -5.33 | 11.0 | 4.7e-28 | -0.60 | 0.03 | 0.06 | TRUE |
96 | The Cancer Genome Atlas | Breast Invasive Carcinoma | UHRF1BP1 | 0.04 | 0.05 | lasso | 3 | 0.04 | 8.4e-09 | -11.05 | -11.1 | 1.8e-28 | 0.62 | 1.00 | 0.00 | FALSE |
97 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TCP11 | 0.07 | 0.01 | enet | 8 | 0.01 | 8.2e-02 | 4.22 | 5.6 | 2.7e-08 | -0.11 | 0.09 | 0.03 | FALSE |
98 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | UHRF1BP1 | 0.07 | 0.11 | lasso | 3 | 0.07 | 2.6e-04 | -11.01 | -11.0 | 3.2e-28 | 0.62 | 0.75 | 0.03 | FALSE |
99 | The Cancer Genome Atlas | Colon Adenocarcinoma | UHRF1BP1 | 0.08 | 0.11 | lasso | 12 | 0.10 | 2.3e-06 | -11.09 | -11.0 | 4.2e-28 | 0.61 | 0.98 | 0.00 | FALSE |
100 | The Cancer Genome Atlas | Esophageal Carcinoma | UHRF1BP1 | 0.19 | 0.20 | lasso | 10 | 0.17 | 5.2e-06 | -11.01 | -11.0 | 2.3e-28 | 0.62 | 0.89 | 0.02 | FALSE |
101 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SNRPC | 0.06 | 0.07 | lasso | 2 | 0.07 | 6.7e-08 | -11.10 | 11.1 | 1.7e-28 | -0.62 | 1.00 | 0.00 | FALSE |
102 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | UHRF1BP1 | 0.06 | 0.06 | enet | 8 | 0.06 | 1.3e-07 | -10.91 | -8.6 | 5.9e-18 | 0.35 | 0.97 | 0.00 | FALSE |
103 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C6orf106 | 0.04 | 0.01 | blup | 68 | 0.01 | 2.4e-02 | -12.66 | -11.2 | 4.2e-29 | 0.85 | 0.01 | 0.77 | FALSE |
104 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ETV7 | 0.15 | 0.19 | lasso | 5 | 0.20 | 6.8e-22 | 5.12 | -5.2 | 1.6e-07 | -0.05 | 0.99 | 0.01 | FALSE |
105 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | UHRF1BP1 | 0.18 | 0.28 | lasso | 5 | 0.27 | 1.0e-30 | -11.04 | -11.3 | 1.5e-29 | 0.64 | 1.00 | 0.00 | FALSE |
106 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | UHRF1BP1 | 0.08 | 0.09 | blup | 71 | 0.10 | 2.0e-06 | -11.04 | -11.5 | 1.8e-30 | 0.61 | 0.65 | 0.33 | FALSE |
107 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C6orf106 | 0.04 | 0.05 | lasso | 4 | 0.03 | 8.1e-05 | -12.65 | -12.4 | 1.8e-35 | 0.93 | 0.01 | 0.99 | FALSE |
108 | The Cancer Genome Atlas | Brain Lower Grade Glioma | UHRF1BP1 | 0.06 | 0.05 | blup | 70 | 0.04 | 8.6e-06 | -5.33 | -8.3 | 1.3e-16 | 0.22 | 0.97 | 0.00 | FALSE |
109 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | UHRF1BP1 | 0.12 | 0.09 | blup | 70 | 0.06 | 5.6e-04 | -11.06 | -9.6 | 1.3e-21 | 0.64 | 0.20 | 0.32 | FALSE |
110 | The Cancer Genome Atlas | Lung Adenocarcinoma | C6orf106 | 0.03 | 0.03 | lasso | 3 | 0.01 | 7.6e-03 | -7.15 | -9.5 | 2.1e-21 | 0.76 | 0.01 | 0.89 | FALSE |
111 | The Cancer Genome Atlas | Lung Adenocarcinoma | KCTD20 | 0.02 | 0.01 | enet | 9 | 0.01 | 3.2e-02 | 4.27 | -5.7 | 9.3e-09 | -0.02 | 0.04 | 0.21 | FALSE |
112 | The Cancer Genome Atlas | Lung Adenocarcinoma | UHRF1BP1 | 0.06 | 0.07 | enet | 20 | 0.08 | 6.4e-10 | -11.03 | -10.8 | 4.2e-27 | 0.52 | 1.00 | 0.00 | FALSE |
113 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | UHRF1BP1 | 0.04 | 0.06 | blup | 70 | 0.06 | 1.5e-07 | -11.06 | -6.8 | 7.2e-12 | 0.36 | 0.98 | 0.00 | FALSE |
114 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | C6orf106 | 0.14 | 0.07 | enet | 6 | 0.06 | 1.0e-04 | -12.68 | -10.0 | 9.8e-24 | 0.82 | 0.01 | 0.98 | FALSE |
115 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | UHRF1BP1 | 0.06 | 0.07 | lasso | 1 | 0.05 | 1.5e-04 | -10.91 | -10.9 | 1.1e-27 | 0.60 | 0.77 | 0.08 | FALSE |
116 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | UHRF1BP1 | 0.20 | 0.23 | lasso | 16 | 0.25 | 8.3e-11 | -11.09 | -11.1 | 1.2e-28 | 0.60 | 1.00 | 0.00 | FALSE |
117 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | UHRF1BP1 | 0.13 | 0.09 | enet | 13 | 0.10 | 6.4e-05 | -11.06 | -9.4 | 3.8e-21 | 0.53 | 0.30 | 0.39 | FALSE |
118 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RNF8 | 0.05 | 0.00 | blup | 39 | 0.02 | 1.2e-03 | -6.02 | 5.3 | 1.1e-07 | 0.01 | 0.01 | 0.03 | FALSE |
119 | The Cancer Genome Atlas | Prostate Adenocarcinoma | UHRF1BP1 | 0.10 | 0.20 | lasso | 5 | 0.19 | 1.6e-19 | -11.05 | -10.6 | 1.9e-26 | 0.57 | 1.00 | 0.00 | FALSE |
120 | The Cancer Genome Atlas | Soft Tissue Sarcoma | UHRF1BP1 | 0.08 | 0.09 | blup | 71 | 0.08 | 1.0e-05 | -11.09 | -10.8 | 5.3e-27 | 0.50 | 0.77 | 0.04 | FALSE |
121 | The Cancer Genome Atlas | Stomach Adenocarcinoma | UHRF1BP1 | 0.08 | 0.10 | lasso | 1 | 0.10 | 7.1e-08 | -11.09 | -11.1 | 1.5e-28 | 0.62 | 0.99 | 0.01 | FALSE |
122 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PPARD | 0.12 | 0.10 | lasso | 5 | 0.05 | 5.3e-03 | -7.68 | 9.2 | 2.6e-20 | -0.37 | 0.08 | 0.77 | FALSE |
123 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | TMEM217 | 0.11 | 0.06 | enet | 7 | 0.07 | 2.0e-03 | 3.66 | -6.3 | 2.4e-10 | -0.12 | 0.06 | 0.29 | TRUE |
124 | The Cancer Genome Atlas | Thyroid Carcinoma | SNRPC | 0.05 | 0.05 | blup | 31 | 0.05 | 2.9e-05 | -11.06 | 11.9 | 1.2e-32 | -0.71 | 0.82 | 0.09 | FALSE |
125 | The Cancer Genome Atlas | Thyroid Carcinoma | TAF11 | 0.10 | 0.05 | lasso | 4 | 0.05 | 1.1e-05 | -6.83 | -5.4 | 7.2e-08 | 0.16 | 0.27 | 0.06 | FALSE |
126 | The Cancer Genome Atlas | Thyroid Carcinoma | UHRF1BP1 | 0.07 | 0.03 | blup | 71 | 0.05 | 2.8e-05 | -11.03 | -6.3 | 2.9e-10 | 0.20 | 0.77 | 0.01 | FALSE |
127 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | SNRPC | 0.09 | 0.11 | lasso | 2 | 0.10 | 8.1e-04 | -11.08 | 11.1 | 1.6e-28 | -0.62 | 0.06 | 0.28 | FALSE |