[Hub]/) : Traits : Hair Pigment : ← →

chr14:70,676,661-72,273,020

Best TWAS P=6.77e-12 · Best GWAS P=2.67e-12 conditioned to 0.118

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adipose Subcutaneous	PCNX	0.17	0.21	lasso	3	0.22	1.9e-17	-4.5	5.5	4.8e-08	-0.74	0.26	0.74	FALSE
2	GTEx	Adipose Visceral Omentum	PCNX	0.09	0.04	lasso	2	0.03	9.9e-03	-6.8	6.8	8.2e-12	-0.85	0.03	0.91	FALSE
3	GTEx	Artery Aorta	PCNX	0.26	0.32	enet	32	0.29	3.7e-16	-4.5	5.5	4.4e-08	-0.72	0.55	0.45	FALSE
4	GTEx	Artery Tibial	PCNX	0.21	0.32	lasso	5	0.31	6.7e-25	-4.5	5.2	2.6e-07	-0.75	0.91	0.09	FALSE
5	GTEx	Brain Putamen basal ganglia	PCNX	0.22	0.12	lasso	7	0.13	6.8e-04	-6.8	6.3	2.1e-10	-0.86	0.02	0.92	FALSE
6	GTEx	Breast Mammary Tissue (Male)	PCNX	0.11	0.11	lasso	3	0.07	1.3e-02	-6.5	6.4	1.6e-10	-0.80	0.04	0.54	FALSE
7	GTEx	Cells Transformed fibroblasts	PCNX	0.14	0.06	enet	28	0.10	1.2e-07	-4.7	5.7	1.4e-08	-0.65	0.09	0.91	FALSE
8	GTEx	Esophagus Mucosa	PCNX	0.20	0.18	enet	18	0.20	2.4e-13	-6.5	6.4	1.8e-10	-0.82	0.03	0.97	FALSE
9	GTEx	Pituitary	PCNX	0.39	0.35	lasso	3	0.34	2.6e-09	-6.5	6.3	2.6e-10	-0.88	0.02	0.98	FALSE
10	GTEx	Skin Not Sun Exposed Suprapubic	PCNX	0.18	0.18	lasso	4	0.19	1.7e-10	-4.5	5.9	3.2e-09	-0.79	0.04	0.96	FALSE
11	GTEx	Skin Sun Exposed Lower leg	PCNX	0.23	0.29	enet	30	0.29	2.1e-24	-4.5	5.6	2.8e-08	-0.73	0.82	0.18	FALSE
12	GTEx	Testis	PCNX	0.14	0.09	enet	12	0.07	3.2e-04	-4.7	5.7	1.3e-08	-0.77	0.04	0.94	FALSE
13	GTEx	Thyroid	PCNX	0.27	0.29	enet	36	0.27	4.8e-21	-4.5	5.9	3.8e-09	-0.74	0.92	0.08	FALSE
14	METSIM	Adipose	PCNX	0.13	0.11	blup	440	0.11	2.5e-16	-4.8	5.4	8.3e-08	-0.69	0.83	0.17	FALSE
15	The Cancer Genome Atlas	Breast Invasive Carcinoma	PCNX	0.05	0.04	blup	92	0.04	4.2e-09	-6.8	5.3	1.3e-07	-0.70	0.02	0.98	FALSE
16	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PCNX	0.08	0.01	blup	91	0.02	6.2e-03	-6.9	5.9	4.4e-09	-0.87	0.02	0.94	FALSE
17	The Cancer Genome Atlas	Brain Lower Grade Glioma	PCNX	0.03	0.02	blup	92	0.03	4.9e-04	-6.9	6.7	1.8e-11	-0.90	0.02	0.98	FALSE
18	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PCNX	0.04	0.04	lasso	4	0.03	2.4e-04	-6.5	6.9	6.8e-12	-0.95	0.01	0.98	TRUE
19	The Cancer Genome Atlas	Prostate Adenocarcinoma	PCNX	0.06	0.06	blup	91	0.07	7.1e-08	-4.6	5.3	1.2e-07	-0.66	0.13	0.87	FALSE
20	The Cancer Genome Atlas	Testicular Germ Cell Tumors	PCNX	0.17	0.09	blup	92	0.11	1.5e-04	-6.5	6.5	8.5e-11	-0.81	0.01	0.87	FALSE
21	The Cancer Genome Atlas	Thyroid Carcinoma	PCNX	0.08	0.06	blup	91	0.08	8.8e-08	-6.9	5.9	3.1e-09	-0.71	0.04	0.96	FALSE