4585 significantly associated models · 859 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 752566 | 2051513 | 2 | 1 | 2.7e-08 | 6.4e-10 | 1.5e-03 | 74 | SDF4 |
2 | 1 | 6149122 | 11326788 | 9 | 5 | 7.8e-19 | 4.9e-50 | 3.9e-39 | 23 | CAMTA1 CORT MASP2 PARK7 RERE |
3 | 1 | 15465487 | 17815433 | 9 | 2 | 3.1e-20 | 1.1e-31 | 1.2e-21 | 34 | MST1L RP11-169K16.9 |
4 | 1 | 22648411 | 25558152 | 9 | 5 | 5.9e-12 | 8.3e-12 | NaN | NaN | C1orf201 NIPAL3 RCAN3 RP1-184J9.2 STPG1 |
5 | 1 | 26104973 | 27971502 | 7 | 2 | 1.7e-11 | 7.5e-11 | 9.4e-01 | 100 | HMGN2 NUDC |
6 | 1 | 36079508 | 37494602 | 2 | 1 | 9.9e-08 | 3.9e-07 | 1.0e+00 | 100 | RP11-268J15.5 |
7 | 1 | 58182151 | 59733702 | 2 | 1 | 1.6e-08 | 1.4e-07 | 1.0e+00 | 100 | OMA1 |
8 | 1 | 84694242 | 86289082 | 3 | 1 | 3.2e-11 | 1.2e-10 | 1.4e-01 | 95 | MCOLN3 |
9 | 1 | 149672809 | 150697710 | 7 | 1 | 3.7e-10 | 1.2e-07 | 1.8e-01 | 94 | BOLA1 |
10 | 1 | 150816886 | 152249720 | 1 | 1 | 3.1e-07 | 1.5e-07 | 1.1e-06 | 14 | TUFT1 |
11 | 1 | 152817053 | 154279975 | 2 | 1 | 6.5e-12 | 1.3e-13 | 6.7e-06 | 63 | S100A16 |
12 | 1 | 154296076 | 156671469 | 29 | 8 | 4.7e-20 | 3.2e-18 | NaN | NaN | GBAP1 MSTO2P RIT1 THBS3 |
13 | 1 | 167353992 | 168867600 | 2 | 1 | 8.3e-08 | 2.3e-11 | 2.2e-05 | 60 | TIPRL |
14 | 1 | 191846765 | 193235380 | 1 | 1 | 2.9e-24 | 9.2e-26 | 1.0e+00 | 100 | RGS1 |
15 | 2 | 19701837 | 21544066 | 3 | 1 | 4.6e-13 | 7.9e-15 | 4.8e-03 | 87 | PUM2 |
16 | 2 | 24348096 | 25837917 | 3 | 1 | 9.1e-11 | 1.0e-24 | 8.4e-18 | 30 | ADCY3 |
17 | 2 | 26592429 | 29344127 | 20 | 3 | 2.7e-25 | 2.3e-46 | 3.7e-17 | 65 | AC074117.10 NRBP1 RP11-373D23.3 |
18 | 2 | 41579722 | 44149442 | 3 | 2 | 1.1e-51 | 3.1e-71 | 2.1e-20 | 73 | PKDCC ZFP36L2 |
19 | 2 | 62658256 | 64817256 | 5 | 1 | 1.6e-12 | 1.1e-11 | 1.9e-01 | 96 | WDPCP |
20 | 2 | 69422629 | 71228388 | 4 | 2 | 8.3e-17 | 1.7e-14 | 9.9e-02 | 95 | FAM136A SNRNP27 |
21 | 2 | 88239332 | 89130009 | 1 | 1 | 2.2e-09 | 2.1e-27 | 9.3e-20 | 30 | AC104134.2 |
22 | 2 | 134513621 | 136403272 | 5 | 1 | 1.4e-36 | 1.0e-37 | 1.0e+00 | 100 | TMEM163 |
23 | 2 | 191190180 | 192981038 | 3 | 1 | 7.0e-14 | 2.7e-14 | 1.0e+00 | 100 | AC067945.4 |
24 | 2 | 221594497 | 223412813 | 2 | 5 | 1.2e-97 | 2.5e-217 | 2.2e-83 | 62 | EPHA4 PAX3 |
25 | 2 | 233047291 | 234434621 | 5 | 1 | 5.2e-10 | 1.7e-09 | 1.0e+00 | 100 | C2orf82 |
26 | 2 | 239510492 | 240078905 | 1 | 1 | 1.7e-13 | 3.1e-43 | 2.4e-32 | 26 | TWIST2 |
27 | 3 | 11350553 | 13402150 | 4 | 2 | 1.2e-11 | 1.4e-18 | 3.1e-14 | 26 | MKRN2 VGLL4 |
28 | 3 | 41996136 | 43484967 | 4 | 1 | 1.2e-09 | 1.5e-09 | 1.0e+00 | 100 | ZBTB47 |
29 | 3 | 69093598 | 70708646 | 1 | 1 | 5.7e-11 | 1.1e-20 | 4.9e-16 | 24 | MITF |
30 | 3 | 121435624 | 123672874 | 10 | 8 | 2.7e-48 | 7.9e-77 | NaN | NaN | HSPBAP1 LOC100129550 PARP14 RP11-67L2.2 SEC22A |
31 | 3 | 126009008 | 127452273 | 1 | 1 | 7.1e-11 | 6.5e-09 | 8.9e-01 | 100 | PLXNA1 |
32 | 3 | 135988412 | 138819532 | 3 | 2 | 3.3e-13 | 2.4e-13 | 1.0e+00 | 100 | IL20RB MRAS |
33 | 3 | 140074782 | 142640214 | 5 | 3 | 5.5e-119 | 6.2e-112 | 1.0e+00 | 100 | ATP1B3 TFDP2 ZBTB38 |
34 | 3 | 151262987 | 152878838 | 1 | 1 | 1.2e-07 | 5.8e-20 | 5.9e-14 | 33 | MBNL1 |
35 | 3 | 153292676 | 154733231 | 2 | 1 | 4.4e-10 | 8.6e-09 | 3.0e-01 | 97 | DHX36 |
36 | 4 | 54087096 | 54762082 | 1 | 1 | 3.4e-08 | 3.4e-11 | 1.2e-04 | 66 | LNX1 |
37 | 4 | 57080198 | 58531645 | 4 | 1 | 8.3e-09 | 4.3e-08 | 4.8e-02 | 87 | REST |
38 | 4 | 77117574 | 82578407 | 7 | 14 | 2.4e-53 | 5.8e-77 | NaN | NaN | ANXA3 BMP2K C4orf22 CNOT6L FRAS1 SHROOM3 |
39 | 4 | 85698680 | 87621473 | 2 | 1 | 3.5e-08 | 5.1e-38 | 7.7e-34 | 12 | RP13-514E23.2 |
40 | 4 | 105373669 | 106897596 | 1 | 1 | 2.5e-09 | 9.6e-29 | 4.5e-24 | 17 | TET2 |
41 | 4 | 108047174 | 109781788 | 3 | 2 | 2.2e-12 | 6.6e-46 | 3.6e-40 | 13 | LOC285456 SGMS2 |
42 | 4 | 185434005 | 186997767 | 3 | 1 | 5.7e-09 | 2.0e-09 | 1.0e+00 | 100 | KIAA1430 |
43 | 5 | 32740984 | 34706321 | 4 | 7 | 1.8e-54 | 0.0e+00 | 0.0e+00 | 57 | ADAMTS12 AMACR RXFP3 TARS |
44 | 5 | 49462228 | 50432178 | 1 | 1 | 1.4e-07 | 5.9e-07 | 4.6e-01 | 98 | EMB |
45 | 5 | 52157374 | 53672849 | 1 | 3 | 4.6e-47 | 3.1e-102 | 1.7e-36 | 66 | NDUFS4 |
46 | 5 | 55524108 | 56923759 | 2 | 2 | 2.8e-18 | 7.6e-25 | 6.6e-08 | 72 | CTD-2310F14.1 MIER3 |
47 | 5 | 65194584 | 67161259 | 1 | 1 | 5.8e-10 | 1.1e-07 | 4.3e-01 | 98 | MAST4 |
48 | 5 | 78710606 | 80644174 | 4 | 3 | 1.5e-23 | 1.4e-23 | 1.0e+00 | 100 | DHFR SERINC5 ZFYVE16 |
49 | 5 | 89115932 | 90707716 | 2 | 1 | 1.3e-19 | 3.4e-69 | 6.3e-54 | 23 | GPR98 |
50 | 6 | 202452 | 1408677 | 3 | 13 | 0.0e+00 | 0.0e+00 | NaN | NaN | EXOC2 IRF4 |
51 | 6 | 2584910 | 4155792 | 1 | 2 | 4.6e-09 | 1.1e-16 | 1.1e-06 | 65 | SLC22A23 |
52 | 6 | 10245366 | 10850468 | 1 | 1 | 3.7e-08 | 3.5e-20 | 2.4e-14 | 31 | GCNT2 |
53 | 6 | 19703618 | 21930988 | 2 | 1 | 6.2e-22 | 4.9e-24 | 9.4e-04 | 89 | CDKAL1 |
54 | 6 | 34528785 | 35987507 | 2 | 1 | 3.7e-12 | 2.1e-08 | 9.8e-01 | 100 | ZNF76 |
55 | 6 | 44079216 | 46745999 | 2 | 2 | 3.2e-15 | 2.5e-17 | 4.7e-04 | 83 | CLIC5 SUPT3H |
56 | 6 | 51230788 | 52198802 | 1 | 2 | 1.8e-12 | 6.3e-34 | 2.5e-24 | 30 | PKHD1 |
57 | 6 | 108183628 | 109704062 | 1 | 1 | 2.9e-07 | 6.3e-10 | 5.3e-04 | 69 | FOXO3 |
58 | 6 | 129638583 | 132647962 | 4 | 3 | 3.9e-12 | 5.3e-19 | 2.2e-04 | 83 | AKAP7 L3MBTL3 MED23 |
59 | 6 | 151030107 | 152470136 | 2 | 1 | 3.8e-23 | 3.0e-30 | 4.3e-11 | 67 | AKAP12 |
60 | 6 | 158041511 | 159931105 | 4 | 11 | 2.2e-137 | 1.2e-145 | NaN | NaN | DYNLT1 EZR TULP4 |
61 | 7 | 2524359 | 3131792 | 1 | 1 | 9.4e-10 | 6.3e-08 | 2.3e-03 | 68 | GNA12 |
62 | 7 | 18364750 | 19854141 | 1 | 1 | 1.1e-10 | 1.0e-14 | 9.6e-06 | 67 | TWIST1 |
63 | 7 | 22548655 | 23941735 | 1 | 1 | 1.4e-07 | 3.5e-06 | 1.4e-01 | 90 | AC005082.12 |
64 | 7 | 27186596 | 28978986 | 2 | 2 | 4.3e-46 | 1.0e-49 | 3.9e-01 | 100 | JAZF1 |
65 | 7 | 90874777 | 92435648 | 1 | 1 | 3.0e-07 | 1.5e-46 | 7.8e-47 | -1 | AKAP9 |
66 | 7 | 99081730 | 101577038 | 16 | 7 | 2.9e-53 | 1.2e-40 | NaN | NaN | GIGYF1 GNB2 TRIM56 TRIP6 UFSP1 |
67 | 7 | 104825819 | 106372903 | 1 | 1 | 1.2e-09 | 6.0e-35 | 3.7e-27 | 23 | CDHR3 |
68 | 7 | 130391504 | 131035864 | 1 | 1 | 1.1e-52 | 6.7e-114 | 3.7e-63 | 45 | FLJ43663 |
69 | 7 | 143425361 | 144768633 | 2 | 1 | 9.3e-08 | 5.9e-09 | 2.0e-02 | 84 | ARHGEF5 |
70 | 8 | 21711236 | 23498725 | 2 | 2 | 1.4e-08 | 2.5e-28 | 1.5e-26 | 7 | PEBP4 SORBS3 |
71 | 8 | 37495521 | 38952995 | 2 | 2 | 6.3e-11 | 4.5e-22 | 1.4e-13 | 41 | RP11-513D5.2 TACC1 |
72 | 8 | 41318439 | 42727452 | 1 | 1 | 7.3e-08 | 6.0e-08 | 6.3e-02 | 88 | AP3M2 |
73 | 8 | 81877396 | 83452091 | 4 | 13 | 1.2e-80 | 3.3e-77 | 1.0e+00 | 100 | CHMP4C SNX16 ZFAND1 |
74 | 8 | 108515373 | 110190556 | 2 | 2 | 1.3e-30 | 8.3e-27 | 4.2e-03 | 93 | EIF3E |
75 | 8 | 118563271 | 119371015 | 1 | 1 | 3.0e-07 | 1.4e-10 | 4.9e-06 | 49 | EXT1 |
76 | 9 | 108998 | 1162143 | 4 | 2 | 1.1e-37 | 7.0e-39 | 3.2e-03 | 95 | CBWD1 DOCK8 |
77 | 9 | 4934896 | 6697128 | 4 | 3 | 3.0e-11 | 1.7e-15 | 5.0e-03 | 88 | ERMP1 RANBP6 RP11-207C16.4 |
78 | 9 | 11988659 | 13977570 | 4 | 7 | 3.0e-125 | 4.4e-165 | NaN | NaN | C9orf150 LURAP1L MPDZ TYRP1 |
79 | 9 | 15714465 | 18201083 | 2 | 2 | 9.9e-18 | 5.0e-97 | 3.2e-73 | 25 | BNC2 CNTLN |
80 | 9 | 21303958 | 22819407 | 2 | 1 | 2.8e-18 | 9.9e-22 | 3.9e-06 | 77 | CDKN2B |
81 | 9 | 26851195 | 28272794 | 2 | 1 | 1.3e-13 | 3.4e-12 | 2.9e-03 | 82 | C9orf72 |
82 | 9 | 99762891 | 101652673 | 4 | 1 | 6.4e-33 | 1.0e-34 | 2.0e-10 | 73 | C9orf156 |
83 | 9 | 101974824 | 103434500 | 1 | 1 | 1.2e-10 | 5.0e-11 | 1.0e+00 | 100 | STX17 |
84 | 9 | 122920438 | 124487495 | 3 | 1 | 9.5e-10 | 1.2e-08 | 3.0e-02 | 86 | TRAF1 |
85 | 9 | 125453469 | 127872298 | 4 | 10 | 2.0e-132 | 9.1e-170 | 1.6e-95 | 44 | DENND1A LHX2 NEK6 PSMB7 |
86 | 9 | 128980174 | 130673419 | 2 | 1 | 8.0e-11 | 1.9e-10 | 2.7e-01 | 97 | RALGPS1 |
87 | 10 | 17541614 | 19027696 | 1 | 1 | 9.0e-11 | 1.5e-08 | 6.9e-01 | 100 | SLC39A12 |
88 | 10 | 33701628 | 36560408 | 4 | 2 | 5.2e-37 | 1.5e-36 | 1.0e+00 | 100 | CUL2 PARD3 |
89 | 10 | 73158678 | 75079280 | 4 | 1 | 7.2e-10 | 1.2e-11 | 4.6e-03 | 82 | MICU1 |
90 | 10 | 80443273 | 82139791 | 2 | 2 | 1.6e-21 | 9.5e-72 | 4.2e-46 | 37 | BEND3P3 ZCCHC24 |
91 | 10 | 110937872 | 113538188 | 5 | 2 | 7.9e-11 | 2.6e-13 | 9.3e-04 | 80 | ADD3 LOC282997 |
92 | 11 | 198510 | 567630 | 1 | 1 | 2.9e-07 | 1.7e-06 | 9.8e-01 | 100 | IFITM3 |
93 | 11 | 2068717 | 2564409 | 1 | 1 | 2.4e-07 | 4.9e-07 | 2.2e-03 | 63 | C11orf21 |
94 | 11 | 2678653 | 3188629 | 1 | 1 | 2.4e-09 | 3.0e-05 | 5.7e-01 | 98 | SLC22A18 |
95 | 11 | 6755218 | 8375907 | 3 | 2 | 1.4e-57 | 3.0e-61 | 1.0e+00 | 100 | CTD-2516F10.2 PPFIBP2 |
96 | 11 | 9105636 | 11027552 | 2 | 1 | 1.5e-13 | 7.6e-13 | 1.6e-01 | 96 | ADM |
97 | 11 | 16072004 | 19128224 | 6 | 7 | 3.2e-24 | 5.1e-28 | 1.4e-19 | 32 | C11orf58 GTF2H1 HPS5 LDHA NUCB2 |
98 | 11 | 26818083 | 28220506 | 2 | 1 | 1.7e-10 | 3.5e-10 | 2.7e-03 | 77 | CCDC34 |
99 | 11 | 32602500 | 33112903 | 1 | 1 | 4.1e-09 | 2.2e-11 | 6.4e-04 | 74 | PRRG4 |
100 | 11 | 43209204 | 44640268 | 2 | 2 | 2.3e-14 | 6.4e-19 | 3.6e-07 | 67 | ALKBH3 ALX4 |
101 | 11 | 46010847 | 48133526 | 9 | 1 | 1.3e-15 | 1.8e-12 | 7.8e-01 | 100 | ACP2 |
102 | 11 | 60846825 | 63284510 | 6 | 2 | 3.0e-24 | 2.3e-34 | 9.0e-28 | 20 | EML3 FADS2 |
103 | 11 | 63991581 | 70934040 | 42 | 24 | 0.0e+00 | 0.0e+00 | NaN | NaN | ALDH3B1 AP000487.5 C11orf80 CCND1 IGHMBP2 KAT5 LRP5 MRGPRF MRPL21 MYEOV POLA2 RP11-554A11.9 RP11-757G1.6 TBX10 TPCN2 |
104 | 11 | 76602665 | 78979645 | 17 | 10 | 1.3e-107 | 6.5e-110 | NaN | NaN | AAMDC GAB2 INTS4 KCTD21 KCTD21-AS1 NARS2 USP35 |
105 | 11 | 87328298 | 88758601 | 1 | 1 | 7.5e-12 | 2.3e-122 | 2.7e-112 | 8 | CTSC |
106 | 11 | 89175387 | 90616949 | 1 | 8 | 8.9e-34 | 2.8e-55 | NaN | NaN | NAALAD2 |
107 | 11 | 117524455 | 118046570 | 1 | 1 | 2.0e-07 | 1.3e-08 | 9.1e-04 | 66 | TMPRSS13 |
108 | 11 | 118205702 | 119659753 | 4 | 1 | 3.8e-12 | 2.2e-10 | 2.1e-01 | 96 | HMBS |
109 | 11 | 133952750 | 134496459 | 1 | 1 | 1.1e-07 | 1.5e-05 | 5.1e-03 | 58 | GLB1L2 |
110 | 12 | 12515184 | 13990434 | 2 | 1 | 5.7e-08 | 2.0e-07 | 5.8e-01 | 99 | HEBP1 |
111 | 12 | 46077695 | 47465082 | 1 | 1 | 8.1e-15 | 1.3e-14 | 1.0e-01 | 96 | SLC38A2 |
112 | 12 | 48605088 | 50364707 | 11 | 1 | 3.5e-17 | 7.4e-17 | 1.0e+00 | 100 | PRKAG1 |
113 | 12 | 52595174 | 53111327 | 2 | 1 | 5.1e-09 | 5.2e-08 | 8.0e-01 | 100 | KRT6B |
114 | 12 | 55694116 | 57125879 | 2 | 1 | 1.3e-08 | 3.8e-08 | 1.8e-01 | 94 | RPS26 |
115 | 12 | 57249600 | 58677299 | 1 | 1 | 1.7e-07 | 5.1e-17 | 6.6e-12 | 33 | KIF5A |
116 | 12 | 64415030 | 65969015 | 2 | 1 | 7.2e-17 | 3.8e-17 | 1.0e+00 | 100 | GNS |
117 | 12 | 86125364 | 87480945 | 1 | 1 | 9.0e-10 | 1.8e-29 | 1.2e-35 | -22 | MGAT4C |
118 | 12 | 87731557 | 90799212 | 10 | 12 | 1.5e-135 | 0.0e+00 | 0.0e+00 | 38 | ATP2B1 C12orf29 CEP290 DUSP6 KITLG POC1B RP11-981P6.1 TMTC3 |
119 | 13 | 30336006 | 31886850 | 1 | 1 | 2.5e-08 | 1.2e-10 | 6.6e-10 | 8 | HMGB1 |
120 | 13 | 38565127 | 40160541 | 1 | 1 | 5.4e-09 | 2.8e-17 | 8.4e-11 | 41 | FREM2 |
121 | 13 | 75160653 | 76875383 | 2 | 2 | 3.7e-12 | 8.0e-12 | 1.0e+00 | 100 | TBC1D4 UCHL3 |
122 | 13 | 77787826 | 79931871 | 2 | 3 | 1.8e-164 | 0.0e+00 | 3.4e-146 | 55 | EDNRB RNF219 |
123 | 13 | 94398894 | 95983387 | 3 | 7 | 1.0e-118 | 1.6e-129 | NaN | NaN | DCT GPR180 TGDS |
124 | 13 | 114052470 | 115106996 | 1 | 1 | 4.0e-08 | 4.1e-11 | 2.2e-04 | 69 | RASA3 |
125 | 14 | 50750577 | 51343599 | 1 | 1 | 2.3e-07 | 2.9e-12 | 6.7e-07 | 49 | ATL1 |
126 | 14 | 60017897 | 62134085 | 3 | 1 | 2.8e-15 | 3.6e-16 | 1.7e-02 | 91 | PPM1A |
127 | 14 | 63453139 | 65389403 | 2 | 1 | 8.8e-20 | 2.2e-22 | 9.7e-06 | 79 | SGPP1 |
128 | 14 | 69006755 | 69506574 | 1 | 1 | 1.5e-09 | 3.1e-27 | 1.9e-19 | 30 | ZFP36L1 |
129 | 14 | 70676661 | 72273020 | 1 | 1 | 6.8e-12 | 2.7e-12 | 1.2e-01 | 95 | PCNX |
130 | 14 | 91553016 | 93994870 | 10 | 16 | 2.5e-252 | 0.0e+00 | NaN | NaN | ATXN3 FBLN5 GOLGA5 LGMN RP11-529H20.5 RP11-529H20.6 SLC24A4 TC2N TRIP11 |
131 | 14 | 103108478 | 105211221 | 14 | 3 | 3.0e-22 | 7.3e-17 | 4.5e-01 | 99 | APOPT1 C14orf153 KLC1 |
132 | 15 | 27302102 | 30260500 | 6 | 10 | 0.0e+00 | 0.0e+00 | 0.0e+00 | 62 | APBA2 GOLGA8M HERC2 NDNL2 OCA2 WHAMMP2 |
133 | 15 | 48187597 | 48715448 | 1 | 1 | 1.2e-09 | 5.7e-13 | 1.0e-04 | 71 | MYEF2 |
134 | 15 | 55226219 | 55735486 | 1 | 1 | 9.6e-08 | 1.7e-07 | 3.6e-01 | 97 | RSL24D1 |
135 | 15 | 56517524 | 58289739 | 1 | 1 | 1.6e-07 | 2.2e-09 | 3.9e-03 | 77 | TCF12 |
136 | 15 | 80377452 | 84573491 | 25 | 18 | 1.3e-65 | 6.9e-85 | NaN | NaN | AP3B2 BTBD1 C15orf26 HDGFRP3 IL16 LOC80154 RP11-152F13.3 RP11-761I4.4 STARD5 |
137 | 15 | 85425097 | 86821656 | 1 | 1 | 6.1e-08 | 3.1e-11 | 9.2e-08 | 35 | RP11-815J21.2 |
138 | 15 | 90730363 | 92135418 | 1 | 1 | 1.8e-11 | 4.2e-11 | 2.0e-01 | 96 | FES |
139 | 16 | 3611610 | 5510848 | 9 | 1 | 2.3e-10 | 1.5e-09 | 1.0e+00 | 100 | NMRAL1 |
140 | 16 | 9930580 | 11373405 | 2 | 2 | 1.2e-08 | 9.5e-09 | 3.1e-01 | 97 | EMP2 TEKT5 |
141 | 16 | 52222053 | 52828325 | 1 | 1 | 4.6e-08 | 8.4e-09 | 4.7e-02 | 88 | TOX3 |
142 | 16 | 71429924 | 72845749 | 1 | 1 | 1.4e-08 | 4.1e-08 | 2.4e-02 | 83 | DHX38 |
143 | 16 | 86723417 | 90172696 | 58 | 34 | 0.0e+00 | 0.0e+00 | NaN | NaN | ACSF3 APRT BANP CDH15 CTD-2555A7.3 CYBA DBNDD1 DEF8 FANCA GALNS MAP1LC3B MVD RNF166 RP5-1142A6.2 RP5-1142A6.5 RPL13 SNAI3 SNAI3-AS1 SPG7 URAHP VPS9D1 ZFPM1 |
144 | 17 | 17400972 | 18923818 | 15 | 2 | 6.8e-17 | 1.7e-12 | 3.8e-01 | 98 | ALKBH5 SMCR7 |
145 | 17 | 37584368 | 39221312 | 3 | 2 | 1.4e-10 | 2.2e-23 | 2.7e-16 | 32 | KRT12 MSL1 |
146 | 17 | 39521015 | 40017491 | 1 | 1 | 8.9e-09 | 9.9e-25 | 2.9e-24 | 2 | KRT16 |
147 | 17 | 43871147 | 43913030 | 1 | 1 | 2.2e-10 | 4.0e-06 | 8.0e-01 | 100 | KANSL1 |
148 | 17 | 44788310 | 48452756 | 38 | 15 | 5.2e-210 | 2.8e-185 | NaN | NaN | ARL17A EFCAB13 LRRC37A2 MRPL10 MRPL45P2 PNPO RP11-6N17.10 RP11-6N17.6 SCRN2 SNF8 SPOP WNT3 |
149 | 17 | 54272304 | 55667722 | 1 | 1 | 3.1e-22 | 1.2e-42 | 4.9e-23 | 48 | MIR3614 |
150 | 17 | 62973790 | 64251733 | 1 | 1 | 8.3e-08 | 1.4e-11 | 1.5e-11 | 0 | AXIN2 |
151 | 17 | 73070405 | 74574103 | 2 | 2 | 1.2e-07 | 1.6e-07 | 5.6e-02 | 87 | GRB2 TRIM47 |
152 | 17 | 78398243 | 81051007 | 41 | 30 | 3.3e-181 | 0.0e+00 | NaN | NaN | ACTG1 ASPSCR1 B3GNTL1 DUS1L FN3KRP FSCN2 LRRC45 METRNL MYADML2 NPLOC4 P4HB RAC3 RP11-497H17.1 SLC38A10 STRA13 TBCD TSPAN10 WDR45B |
153 | 18 | 42728818 | 44244840 | 1 | 1 | 4.4e-15 | 5.0e-22 | 1.6e-09 | 61 | EPG5 |
154 | 19 | 10016470 | 11873382 | 3 | 1 | 6.5e-10 | 5.9e-10 | 1.0e+00 | 100 | LOC147727 |
155 | 19 | 16713332 | 18117646 | 3 | 1 | 7.1e-08 | 1.7e-07 | 1.0e+00 | 100 | MRPL34 |
156 | 19 | 41233298 | 42626207 | 4 | 3 | 8.8e-10 | 1.8e-08 | 3.3e-01 | 97 | AXL B9D2 CTC-435M10.6 |
157 | 19 | 43686328 | 45079808 | 1 | 1 | 7.7e-08 | 6.1e-07 | 3.2e-03 | 65 | ZNF404 |
158 | 20 | 21043102 | 22430527 | 1 | 1 | 1.8e-08 | 1.1e-15 | 9.8e-09 | 49 | RPL41P1 |
159 | 20 | 24485525 | 25878725 | 1 | 2 | 2.5e-12 | 2.6e-22 | 3.1e-07 | 72 | ENTPD6 |
160 | 20 | 29833609 | 36642760 | 73 | 40 | 0.0e+00 | 0.0e+00 | NaN | NaN | BCL2L1 C20orf203 CBFA2T2 CEP250 CHMP4B COMMD7 COX4I2 DNMT3B EDEM2 MANBAL MAPRE1 MMP24-AS1 MROH8 NCOA6 NDRG3 PLUNC PROCR RALY RP4-614O4.12 RP5-1085F17.3 RSL24D1P6 SAMHD1 ZNF341 |
161 | 20 | 56858751 | 58529763 | 3 | 2 | 1.0e-32 | 5.3e-73 | 4.2e-26 | 66 | ZNF831 |
162 | 21 | 26263549 | 27788804 | 3 | 1 | 3.7e-35 | 5.1e-36 | 1.0e+00 | 100 | MRPL39 |
163 | 21 | 43566375 | 46988606 | 3 | 4 | 3.8e-12 | 2.9e-53 | 1.0e-32 | 40 | PTTG1IP RRP1 WDR4 |
164 | 22 | 19241014 | 20330744 | 1 | 1 | 7.1e-09 | 1.4e-13 | 3.4e-06 | 61 | COMT |
165 | 22 | 30860830 | 32296000 | 1 | 1 | 1.8e-07 | 4.2e-07 | 1.0e+00 | 100 | RNF185 |
166 | 22 | 34997079 | 36442122 | 2 | 1 | 1.4e-13 | 1.2e-13 | 1.0e+00 | 100 | TOM1 |
167 | 22 | 39064209 | 42301748 | 6 | 8 | 5.6e-16 | 6.6e-15 | 2.2e-11 | 26 | LOC100506472 PDGFB SLC25A17 SYNGR1 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Brain Cortex | 35 | 3.4 | 83.0 |
GTEx | Stomach | 44 | 3.0 | 76.2 |
GTEx | Breast Mammary Tissue (Male) | 35 | 2.9 | 66.9 |
GTEx | Brain Cerebellum | 62 | 3.1 | 66.8 |
GTEx | Adrenal Gland | 48 | 3.3 | 66.1 |
GTEx | Brain Cerebellar Hemisphere | 42 | 2.8 | 64.2 |
GTEx | Colon Sigmoid | 45 | 3.1 | 62.1 |
GTEx | Skin Not Sun Exposed Suprapubic | 91 | 3.7 | 61.5 |
GTEx | Small Intestine Terminal Ileum | 17 | 3.7 | 59.5 |
GTEx | Heart Atrial Appendage | 48 | 3.0 | 48.6 |
GTEx | Pancreas | 54 | 3.3 | 48.5 |
GTEx | Heart Left Ventricle | 46 | 3.0 | 44.5 |
GTEx | Artery Coronary | 30 | 2.5 | 44.1 |
GTEx | Colon Transverse | 72 | 3.5 | 42.6 |
GTEx | Uterus | 19 | 3.4 | 42.5 |
GTEx | Esophagus Muscularis | 95 | 2.9 | 42.0 |
GTEx | Pituitary | 38 | 3.4 | 41.4 |
GTEx | Adipose Subcutaneous | 116 | 3.3 | 39.8 |
GTEx | Prostate | 27 | 3.2 | 36.3 |
GTEx | Artery Aorta | 102 | 3.4 | 36.2 |
GTEx | Thyroid | 134 | 3.4 | 34.6 |
METSIM | Adipose | 124 | 2.7 | 33.9 |
GTEx | Ovary | 25 | 2.8 | 33.1 |
GTEx | Nerve Tibial | 136 | 3.1 | 32.4 |
GTEx | Whole Blood | 69 | 3.5 | 32.4 |
GTEx | Lung | 89 | 3.1 | 30.9 |
GTEx | Artery Tibial | 113 | 3.0 | 30.8 |
GTEx | Skin Sun Exposed Lower leg | 125 | 3.4 | 30.5 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 57 | 2.8 | 30.4 |
GTEx | Cells Transformed fibroblasts | 135 | 3.2 | 29.6 |
GTEx | Spleen | 49 | 3.5 | 29.6 |
GTEx | Brain Hypothalamus | 20 | 3.4 | 29.0 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 115 | 2.7 | 28.4 |
CommonMind | Brain Pre-frontal Cortex | 142 | 2.6 | 27.4 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 73 | 2.7 | 27.2 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 107 | 2.6 | 26.8 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 46 | 2.8 | 26.6 |
GTEx | Testis | 96 | 3.0 | 25.3 |
The Cancer Genome Atlas | Thyroid Carcinoma | 130 | 2.5 | 24.7 |
GTEx | Breast Mammary Tissue (Female) | 51 | 3.1 | 24.1 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 121 | 2.6 | 23.2 |
GTEx | Breast Mammary Tissue | 55 | 2.8 | 23.0 |
GTEx | Adipose Visceral Omentum | 63 | 3.1 | 22.6 |
GTEx | Muscle Skeletal | 104 | 3.6 | 22.5 |
GTEx | Esophagus Mucosa | 94 | 2.8 | 21.8 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 56 | 3.4 | 21.7 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 51 | 3.0 | 21.7 |
GTEx | Esophagus Gastroesophageal Junction | 47 | 3.3 | 19.5 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 74 | 2.5 | 19.4 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 70 | 2.8 | 17.6 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 115 | 2.6 | 17.0 |
GTEx | Brain Frontal Cortex BA9 | 31 | 3.4 | 16.7 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 39 | 2.9 | 14.9 |
YFS | Blood | 119 | 2.6 | 14.6 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 50 | 2.4 | 14.4 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 35 | 3.3 | 12.4 |
GTEx | Vagina | 21 | 3.3 | 11.8 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 20 | 3.7 | 11.5 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 37 | 2.9 | 11.2 |
GTEx | Brain Nucleus accumbens basal ganglia | 25 | 2.9 | 10.8 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 16 | 3.1 | 10.7 |
NTR | Blood | 71 | 3.0 | 10.4 |
GTEx | Brain Hippocampus | 18 | 3.4 | 9.8 |
GTEx | Brain Putamen basal ganglia | 21 | 3.4 | 9.7 |
GTEx | Liver | 19 | 2.6 | 8.4 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 33 | 3.2 | 8.4 |
GTEx | Cells EBV-transformed lymphocytes | 38 | 2.7 | 8.3 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 27 | 2.4 | 8.0 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 42 | 2.6 | 7.6 |
The Cancer Genome Atlas | Esophageal Carcinoma | 15 | 2.2 | 7.3 |
GTEx | Brain Caudate basal ganglia | 30 | 3.3 | 7.2 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 23 | 2.1 | 7.2 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 20 | 2.9 | 5.8 |
ROSMAP | Brain Pre-frontal Cortex | 83 | 1.9 | 5.6 |