Best TWAS P=9.39e-10 · Best GWAS P=6.29e-08 conditioned to 0.00234
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Colon Adenocarcinoma | GNA12 | 0.09 | 0.00 | blup | 103 | 0.03 | 0.0093 | -2.9 | -5.2 | 2.0e-07 | -0.64 | 0.03 | 0.33 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | GNA12 | 0.04 | 0.01 | blup | 99 | 0.02 | 0.0015 | -5.3 | -6.1 | 9.4e-10 | -0.44 | 0.01 | 0.86 | TRUE |