TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Bipolar Disorder or Schizophrenia
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chr3:1,442,951-3,792,945
Best TWAS P=5.07e-10 · Best GWAS P=2.4e-12 conditioned to 9.76e-06
1.5M
2M
2.5M
3M
3.5M
0
2
4
6
8
10
12
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
CNTN4
0.15
0.03
enet
34
0.05
4.7e-07
4.8
6.2
5.1e-10
0.52
0.02
0.98
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
CNTN4
0.19
0.13
lasso
5
0.14
3.7e-13
6.0
6.1
1.1e-09
0.74
0.80
0.20
FALSE