Best TWAS P=1.28e-13 · Best GWAS P=1.17e-14 conditioned to 0.0018
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Muscularis | NEGR1 | 0.13 | 0.04 | lasso | 3 | 0.05 | 5.1e-04 | -5.1 | 5.5 | 2.8e-08 | -0.45 | 0.62 | 0.23 | FALSE |
| 2 | ROSMAP | Brain Pre-frontal Cortex | NEGR1 | 0.24 | 0.15 | lasso | 8 | 0.22 | 1.3e-27 | 4.4 | 7.4 | 1.3e-13 | -0.78 | 0.03 | 0.97 | TRUE |