Best TWAS P=2.49e-07 · Best GWAS P=3.4e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CISD1 | 0.02 | 0.01 | blup | 41 | 0.01 | 0.016 | -4.9 | -5.2 | 2.5e-07 | 0.96 | 0.01 | 0.73 | TRUE |