[Hub]/) : Traits : Crohns Disease (2017) : ← →

chr20:43,825,556-45,456,440

Best TWAS P=3.69e-09 · Best GWAS P=1.33e-09 conditioned to 0.0303

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
4	The Cancer Genome Atlas	Lung Adenocarcinoma	MMP9	0.03	0.01	blup	46	0.01	6.7e-02	-5.7	5.9	3.7e-09	-0.72	0.01	0.72	TRUE
2	METSIM	Adipose	CD40	0.07	0.04	lasso	4	0.05	3.5e-08	5.0	-5.7	1.2e-08	0.36	0.26	0.74	TRUE
1	GTEx	Skin Not Sun Exposed Suprapubic	NEURL2	0.17	0.09	lasso	4	0.03	8.7e-03	-5.7	5.8	6.1e-09	-0.98	0.01	0.95	FALSE
3	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	MMP9	0.02	0.02	blup	46	0.02	3.5e-03	-5.2	5.3	1.1e-07	-0.88	0.02	0.78	FALSE