[Hub]/) : Traits : Crohns Disease (2017) : ← →

chr2:60,466,491-62,107,632

Best TWAS P=7.23e-13 · Best GWAS P=5.87e-14 conditioned to 0.0151

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
8	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	PEX13	0.06	0.03	lasso	3	0.04	1.3e-02	6.5	7.2	7.2e-13	0.90	0.00	0.91	TRUE
4	GTEx	Colon Transverse	AC010733.5	0.12	0.00	lasso	6	0.00	4.5e-01	4.3	-7.0	3.5e-12	-0.77	0.02	0.76	FALSE
3	GTEx	Breast Mammary Tissue (Male)	AHSA2	0.27	0.12	lasso	6	0.08	6.3e-03	-5.3	-6.2	4.4e-10	-0.76	0.02	0.86	FALSE
9	The Cancer Genome Atlas	Skin Cutaneous Melanoma	PEX13	0.11	0.00	blup	40	0.03	6.6e-02	-3.9	6.1	1.0e-09	0.51	0.02	0.21	FALSE
6	ROSMAP	Brain Pre-frontal Cortex	PEX13	0.10	0.06	blup	330	0.10	1.7e-12	5.6	6.0	1.9e-09	0.52	0.91	0.09	FALSE
5	GTEx	Uterus	PUS10	0.34	0.21	lasso	8	0.14	7.4e-04	-4.1	-5.8	5.5e-09	-0.53	0.04	0.54	FALSE
10	The Cancer Genome Atlas	Thyroid Carcinoma	PEX13	0.03	0.03	enet	6	0.04	1.9e-04	4.5	5.7	1.3e-08	0.43	0.14	0.24	FALSE
7	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PUS10	0.04	0.00	blup	64	0.03	3.8e-04	5.6	-5.3	9.5e-08	-0.34	0.03	0.04	FALSE
2	GTEx	Brain Nucleus accumbens basal ganglia	KIAA1841	0.17	0.16	lasso	3	0.18	1.7e-05	-5.3	-5.2	2.1e-07	-0.59	0.28	0.33	FALSE
1	GTEx	Brain Cortex	AHSA2	0.25	0.13	enet	13	0.23	5.8e-07	4.6	-5.2	2.4e-07	-0.50	0.75	0.03	FALSE