[Hub]/) : Traits : Depressed Affect (Nagel 2018) : ← →

chr12:109,295,508-110,704,487

Best TWAS P=4.29e-08 · Best GWAS P=5.1e-09 conditioned to 0.0391

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Cells Transformed fibroblasts	MMAB	0.07	0.06	enet	9	0.05	7.3e-05	5.2	-5.5	4.3e-08	-0.91	0.01	0.98	TRUE
3	The Cancer Genome Atlas	Thyroid Carcinoma	KCTD10	0.15	0.08	lasso	6	0.08	2.1e-08	5.0	-5.4	5.9e-08	-0.90	0.04	0.96	FALSE
2	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	MMAB	0.03	0.02	blup	57	0.02	2.2e-03	5.0	-5.1	3.0e-07	-0.74	0.01	0.80	FALSE